Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01006Q8NI28 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 POU5F1P3-201ENST00000428824 1078 ntBASIC16.63■□□□□ 0.25
LINC01006Q8NI28 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 AC092118.2-201ENST00000613495 667 ntBASIC16.63■□□□□ 0.25
LINC01006Q8NI28 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01006Q8NI28 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01006Q8NI28 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 BX276092.2-201ENST00000417668 665 ntBASIC16.61■□□□□ 0.25
LINC01006Q8NI28 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC01006Q8NI28 KRT16P2-201ENST00000414673 1423 ntBASIC16.61■□□□□ 0.25
LINC01006Q8NI28 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 ITM2C-210ENST00000620962 501 ntBASIC16.6■□□□□ 0.25
LINC01006Q8NI28 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01006Q8NI28 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 AC139530.1-201ENST00000575312 1977 ntBASIC16.59■□□□□ 0.25
LINC01006Q8NI28 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.59■□□□□ 0.25
LINC01006Q8NI28 KRT18P29-201ENST00000397031 1267 ntBASIC16.59■□□□□ 0.25
LINC01006Q8NI28 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms