Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 RBM17P2-201ENST00000616397 1405 ntBASIC22.22■■□□□ 1.15
SMRP1Q8NCR6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 POU5F1P4-201ENST00000413175 1085 ntBASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 AL359736.2-201ENST00000621992 437 ntBASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMRP1Q8NCR6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
SMRP1Q8NCR6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SMRP1Q8NCR6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMRP1Q8NCR6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.2■■□□□ 1.14
SMRP1Q8NCR6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.2■■□□□ 1.14
SMRP1Q8NCR6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.2■■□□□ 1.14
SMRP1Q8NCR6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.2■■□□□ 1.14
SMRP1Q8NCR6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMRP1Q8NCR6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 MIR718-201ENST00000390190 70 ntBASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMRP1Q8NCR6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 LINC00526-201ENST00000581067 1875 ntBASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMRP1Q8NCR6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 KRT16P2-201ENST00000414673 1423 ntBASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 AC243732.1-201ENST00000612648 864 ntBASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SMRP1Q8NCR6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 LSM12P1-201ENST00000411836 588 ntBASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 AC008403.3-201ENST00000598924 454 ntBASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 AC073912.3-201ENST00000624414 853 ntBASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.16■■□□□ 1.14
SMRP1Q8NCR6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms