Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 AC006455.2-201ENST00000429931 906 ntBASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01561Q8N1V8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 MIR3181-201ENST00000578512 73 ntBASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 AC099791.2-201ENST00000605725 427 ntBASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01561Q8N1V8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 AL356740.2-201ENST00000601559 647 ntBASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01561Q8N1V8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 AC009299.2-201ENST00000482477 511 ntBASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 AP005435.1-201ENST00000529293 1178 ntBASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 AL138724.1-201ENST00000606771 1088 ntBASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01561Q8N1V8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 AF106564.1-201ENST00000607058 2553 ntBASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 UNC93B8-201ENST00000511903 705 ntBASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01561Q8N1V8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms