Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX60Q8IY21 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 CD99P1-205ENST00000527459 561 ntBASIC26.51■■□□□ 1.83
DDX60Q8IY21 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.51■■□□□ 1.83
DDX60Q8IY21 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX60Q8IY21 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX60Q8IY21 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
DDX60Q8IY21 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX60Q8IY21 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.5■■□□□ 1.83
DDX60Q8IY21 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
DDX60Q8IY21 AC016405.3-201ENST00000607710 860 ntBASIC26.5■■□□□ 1.83
DDX60Q8IY21 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX60Q8IY21 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX60Q8IY21 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.49■■□□□ 1.83
DDX60Q8IY21 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
DDX60Q8IY21 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
DDX60Q8IY21 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
DDX60Q8IY21 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX60Q8IY21 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DDX60Q8IY21 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX60Q8IY21 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX60Q8IY21 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX60Q8IY21 AC105036.2-201ENST00000569468 176 ntBASIC26.49■■□□□ 1.83
DDX60Q8IY21 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX60Q8IY21 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX60Q8IY21 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DDX60Q8IY21 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DDX60Q8IY21 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
DDX60Q8IY21 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
DDX60Q8IY21 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
DDX60Q8IY21 TERF1P5-201ENST00000477545 1207 ntBASIC26.48■■□□□ 1.83
DDX60Q8IY21 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
DDX60Q8IY21 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.48■■□□□ 1.83
DDX60Q8IY21 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX60Q8IY21 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.48■■□□□ 1.83
DDX60Q8IY21 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX60Q8IY21 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
DDX60Q8IY21 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX60Q8IY21 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.48■■□□□ 1.83
DDX60Q8IY21 AC073210.2-201ENST00000430369 194 ntBASIC26.48■■□□□ 1.83
DDX60Q8IY21 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.48■■□□□ 1.83
DDX60Q8IY21 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX60Q8IY21 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.47■■□□□ 1.83
DDX60Q8IY21 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX60Q8IY21 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX60Q8IY21 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX60Q8IY21 MKRN4P-201ENST00000444706 1521 ntBASIC26.47■■□□□ 1.83
DDX60Q8IY21 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX60Q8IY21 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX60Q8IY21 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX60Q8IY21 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.46■■□□□ 1.83
DDX60Q8IY21 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX60Q8IY21 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.46■■□□□ 1.83
DDX60Q8IY21 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX60Q8IY21 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX60Q8IY21 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX60Q8IY21 KRT16P2-201ENST00000414673 1423 ntBASIC26.46■■□□□ 1.83
DDX60Q8IY21 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX60Q8IY21 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX60Q8IY21 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
DDX60Q8IY21 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX60Q8IY21 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
DDX60Q8IY21 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.83
DDX60Q8IY21 AC093787.1-201ENST00000450396 207 ntBASIC26.45■■□□□ 1.83
DDX60Q8IY21 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
DDX60Q8IY21 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.45■■□□□ 1.83
DDX60Q8IY21 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.45■■□□□ 1.83
DDX60Q8IY21 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
DDX60Q8IY21 RBM17P2-201ENST00000616397 1405 ntBASIC26.45■■□□□ 1.83
DDX60Q8IY21 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX60Q8IY21 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX60Q8IY21 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
DDX60Q8IY21 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
DDX60Q8IY21 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX60Q8IY21 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX60Q8IY21 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX60Q8IY21 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
DDX60Q8IY21 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
DDX60Q8IY21 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
DDX60Q8IY21 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX60Q8IY21 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX60Q8IY21 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.44■■□□□ 1.82
DDX60Q8IY21 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
DDX60Q8IY21 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.44■■□□□ 1.82
DDX60Q8IY21 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX60Q8IY21 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.44■■□□□ 1.82
DDX60Q8IY21 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
DDX60Q8IY21 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX60Q8IY21 AC083880.1-201ENST00000608266 535 ntBASIC26.44■■□□□ 1.82
DDX60Q8IY21 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.44■■□□□ 1.82
DDX60Q8IY21 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX60Q8IY21 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.44■■□□□ 1.82
DDX60Q8IY21 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.44■■□□□ 1.82
DDX60Q8IY21 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms