Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRLF3Q8IUI8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CRLF3Q8IUI8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRLF3Q8IUI8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 AC110285.6-201ENST00000617652 491 ntBASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CRLF3Q8IUI8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CRLF3Q8IUI8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CRLF3Q8IUI8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRLF3Q8IUI8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRLF3Q8IUI8 MIR638-201ENST00000385237 100 ntBASIC21.14■□□□□ 0.97
CRLF3Q8IUI8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CRLF3Q8IUI8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRLF3Q8IUI8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRLF3Q8IUI8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRLF3Q8IUI8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRLF3Q8IUI8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 AC104564.3-201ENST00000582367 638 ntBASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CRLF3Q8IUI8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 AC009102.2-201ENST00000606772 1639 ntBASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CRLF3Q8IUI8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 SRD5A1P1-201ENST00000442297 786 ntBASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRLF3Q8IUI8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CRLF3Q8IUI8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms