Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 ID1-201ENST00000376105 1233 ntBASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 SLC7A5P2-201ENST00000553010 536 ntBASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.52■■□□□ 1.2
LRRTM3Q86VH5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
LRRTM3Q86VH5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRTM3Q86VH5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.51■■□□□ 1.19
LRRTM3Q86VH5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.51■■□□□ 1.19
LRRTM3Q86VH5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
LRRTM3Q86VH5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.51■■□□□ 1.19
LRRTM3Q86VH5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LRRTM3Q86VH5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRTM3Q86VH5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 KRT18P20-201ENST00000548986 1279 ntBASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRTM3Q86VH5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.49■■□□□ 1.19
LRRTM3Q86VH5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 AC233723.2-201ENST00000623798 2106 ntBASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.48■■□□□ 1.19
LRRTM3Q86VH5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 AC010542.4-201ENST00000563151 1910 ntBASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRTM3Q86VH5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 HLA-L-209ENST00000420110 1011 ntBASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 FAM99A-202ENST00000538190 1989 ntBASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
LRRTM3Q86VH5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms