Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
RNF180Q86T96 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.75■■□□□ 1.39
RNF180Q86T96 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF180Q86T96 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF180Q86T96 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF180Q86T96 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF180Q86T96 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF180Q86T96 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF180Q86T96 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF180Q86T96 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.74■■□□□ 1.39
RNF180Q86T96 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.74■■□□□ 1.39
RNF180Q86T96 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF180Q86T96 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.74■■□□□ 1.39
RNF180Q86T96 AC006058.3-201ENST00000606217 1069 ntBASIC23.74■■□□□ 1.39
RNF180Q86T96 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF180Q86T96 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF180Q86T96 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
RNF180Q86T96 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF180Q86T96 AC010980.2-201ENST00000587099 1412 ntBASIC23.74■■□□□ 1.39
RNF180Q86T96 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF180Q86T96 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF180Q86T96 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF180Q86T96 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.73■■□□□ 1.39
RNF180Q86T96 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF180Q86T96 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RNF180Q86T96 AL158047.1-201ENST00000445918 881 ntBASIC23.73■■□□□ 1.39
RNF180Q86T96 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF180Q86T96 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF180Q86T96 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.73■■□□□ 1.39
RNF180Q86T96 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF180Q86T96 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.73■■□□□ 1.39
RNF180Q86T96 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF180Q86T96 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.72■■□□□ 1.39
RNF180Q86T96 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF180Q86T96 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF180Q86T96 AC142381.4-202ENST00000563973 229 ntBASIC23.72■■□□□ 1.39
RNF180Q86T96 KRT16P2-201ENST00000414673 1423 ntBASIC23.72■■□□□ 1.39
RNF180Q86T96 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF180Q86T96 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.72■■□□□ 1.39
RNF180Q86T96 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF180Q86T96 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF180Q86T96 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF180Q86T96 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF180Q86T96 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF180Q86T96 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF180Q86T96 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF180Q86T96 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF180Q86T96 RBM17P2-201ENST00000616397 1405 ntBASIC23.71■■□□□ 1.39
RNF180Q86T96 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RNF180Q86T96 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF180Q86T96 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF180Q86T96 AC128676.1-201ENST00000454392 318 ntBASIC23.71■■□□□ 1.39
RNF180Q86T96 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF180Q86T96 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.71■■□□□ 1.39
RNF180Q86T96 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF180Q86T96 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RNF180Q86T96 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RNF180Q86T96 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF180Q86T96 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF180Q86T96 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF180Q86T96 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
RNF180Q86T96 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF180Q86T96 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF180Q86T96 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF180Q86T96 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
RNF180Q86T96 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF180Q86T96 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF180Q86T96 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.7■■□□□ 1.38
RNF180Q86T96 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.7■■□□□ 1.38
RNF180Q86T96 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF180Q86T96 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF180Q86T96 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RNF180Q86T96 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF180Q86T96 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF180Q86T96 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF180Q86T96 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.69■■□□□ 1.38
RNF180Q86T96 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.69■■□□□ 1.38
RNF180Q86T96 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF180Q86T96 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF180Q86T96 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RNF180Q86T96 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.69■■□□□ 1.38
RNF180Q86T96 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF180Q86T96 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF180Q86T96 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF180Q86T96 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF180Q86T96 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF180Q86T96 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF180Q86T96 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF180Q86T96 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF180Q86T96 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF180Q86T96 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF180Q86T96 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
RNF180Q86T96 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF180Q86T96 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF180Q86T96 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF180Q86T96 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF180Q86T96 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF180Q86T96 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF180Q86T96 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.68■■□□□ 1.38
RNF180Q86T96 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms