Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 OR7E47P-201ENST00000546390 1422 ntBASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 TSPY20P-201ENST00000450910 630 ntBASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAI1Q7Z5J4 AC233723.2-201ENST00000623798 2106 ntBASIC18.24■□□□□ 0.51
RAI1Q7Z5J4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.24■□□□□ 0.51
RAI1Q7Z5J4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RAI1Q7Z5J4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAI1Q7Z5J4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.24■□□□□ 0.51
RAI1Q7Z5J4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAI1Q7Z5J4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RAI1Q7Z5J4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAI1Q7Z5J4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 AC012676.1-201ENST00000574705 1949 ntBASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAI1Q7Z5J4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAI1Q7Z5J4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI1Q7Z5J4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RAI1Q7Z5J4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RAI1Q7Z5J4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 MKRN4P-201ENST00000444706 1521 ntBASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI1Q7Z5J4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 AC105036.2-201ENST00000569468 176 ntBASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI1Q7Z5J4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms