Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.68■□□□□ 0.74
NUP54Q7Z3B4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 AC055733.4-201ENST00000638462 1354 ntBASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP54Q7Z3B4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 AP006587.3-201ENST00000525742 1516 ntBASIC19.66■□□□□ 0.74
NUP54Q7Z3B4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP54Q7Z3B4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
NUP54Q7Z3B4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 AC079140.4-201ENST00000507448 529 ntBASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DUX4L2-201ENST00000561772 1275 ntBASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DUX4L6-201ENST00000626483 1275 ntBASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DUX4L1-201ENST00000627662 1275 ntBASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DUX4L8-201ENST00000629013 1275 ntBASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DUX4L3-201ENST00000630187 1275 ntBASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DUX4L7-201ENST00000630678 1275 ntBASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DUX4L5-201ENST00000630834 1275 ntBASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP54Q7Z3B4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP54Q7Z3B4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP54Q7Z3B4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP54Q7Z3B4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP54Q7Z3B4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
NUP54Q7Z3B4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
NUP54Q7Z3B4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP54Q7Z3B4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms