Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00575Q6W349 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00575Q6W349 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00575Q6W349 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00575Q6W349 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00575Q6W349 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00575Q6W349 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00575Q6W349 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 MIR4281-201ENST00000580852 62 ntBASIC13.46□□□□□ -0.25
LINC00575Q6W349 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00575Q6W349 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC00575Q6W349 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC00575Q6W349 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC00575Q6W349 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00575Q6W349 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00575Q6W349 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
LINC00575Q6W349 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00575Q6W349 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00575Q6W349 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00575Q6W349 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC00575Q6W349 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00575Q6W349 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00575Q6W349 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00575Q6W349 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00575Q6W349 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00575Q6W349 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00575Q6W349 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00575Q6W349 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LINC00575Q6W349 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00575Q6W349 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LINC00575Q6W349 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00575Q6W349 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00575Q6W349 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00575Q6W349 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00575Q6W349 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00575Q6W349 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00575Q6W349 AC026471.6-201ENST00000622954 1905 ntBASIC13.45□□□□□ -0.26
LINC00575Q6W349 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 AP005212.1-201ENST00000581547 1997 ntBASIC13.44□□□□□ -0.26
LINC00575Q6W349 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.44□□□□□ -0.26
LINC00575Q6W349 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 AL391422.3-201ENST00000603791 2761 ntBASIC13.44□□□□□ -0.26
LINC00575Q6W349 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00575Q6W349 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00575Q6W349 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00575Q6W349 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00575Q6W349 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LINC00575Q6W349 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LINC00575Q6W349 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LINC00575Q6W349 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00575Q6W349 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00575Q6W349 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00575Q6W349 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00575Q6W349 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00575Q6W349 MTX2-204ENST00000443241 799 ntTSL 3 BASIC13.43□□□□□ -0.26
LINC00575Q6W349 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00575Q6W349 THA1P-201ENST00000590384 1145 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms