Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RTL6Q6ICC9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 LINC00526-201ENST00000581067 1875 ntBASIC19.16■□□□□ 0.66
RTL6Q6ICC9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 AC006970.2-201ENST00000450065 779 ntBASIC19.16■□□□□ 0.66
RTL6Q6ICC9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 ECEL1P1-201ENST00000373592 1742 ntBASIC19.16■□□□□ 0.66
RTL6Q6ICC9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.16■□□□□ 0.66
RTL6Q6ICC9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 GUSBP5-202ENST00000510805 1989 ntBASIC19.15■□□□□ 0.66
RTL6Q6ICC9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 C1orf229-201ENST00000623686 2258 ntBASIC19.15■□□□□ 0.66
RTL6Q6ICC9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 UBE2DNL-204ENST00000602536 740 ntBASIC19.15■□□□□ 0.66
RTL6Q6ICC9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 CLDN5-201ENST00000403084 2357 ntBASIC19.15■□□□□ 0.66
RTL6Q6ICC9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 OR7E47P-201ENST00000546390 1422 ntBASIC19.15■□□□□ 0.66
RTL6Q6ICC9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL6Q6ICC9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTL6Q6ICC9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.14■□□□□ 0.66
RTL6Q6ICC9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 MIR663A-201ENST00000385250 93 ntBASIC19.14■□□□□ 0.65
RTL6Q6ICC9 NCF1B-203ENST00000435988 1254 ntBASIC19.14■□□□□ 0.65
RTL6Q6ICC9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 AP001160.3-201ENST00000601484 763 ntBASIC19.14■□□□□ 0.65
RTL6Q6ICC9 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL6Q6ICC9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RTL6Q6ICC9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 AL109923.1-201ENST00000618799 583 ntBASIC19.12■□□□□ 0.65
RTL6Q6ICC9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTL6Q6ICC9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL6Q6ICC9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms