Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LPCAT4Q643R3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.03■□□□□ 0.8
LPCAT4Q643R3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LPCAT4Q643R3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.02■□□□□ 0.79
LPCAT4Q643R3 C17orf82-201ENST00000623772 1530 ntBASIC20.02■□□□□ 0.79
LPCAT4Q643R3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LPCAT4Q643R3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.01■□□□□ 0.79
LPCAT4Q643R3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20■□□□□ 0.79
LPCAT4Q643R3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20■□□□□ 0.79
LPCAT4Q643R3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LPCAT4Q643R3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LPCAT4Q643R3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20■□□□□ 0.79
LPCAT4Q643R3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LPCAT4Q643R3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20■□□□□ 0.79
LPCAT4Q643R3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LPCAT4Q643R3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LPCAT4Q643R3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LPCAT4Q643R3 DUX4L9-201ENST00000449051 1259 ntBASIC20■□□□□ 0.79
LPCAT4Q643R3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20■□□□□ 0.79
LPCAT4Q643R3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LPCAT4Q643R3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LPCAT4Q643R3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LPCAT4Q643R3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LPCAT4Q643R3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms