Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF220Q5VTB9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF220Q5VTB9 AL035685.1-201ENST00000636663 812 ntBASIC20.39■□□□□ 0.85
RNF220Q5VTB9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF220Q5VTB9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF220Q5VTB9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF220Q5VTB9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF220Q5VTB9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF220Q5VTB9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNF220Q5VTB9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.36■□□□□ 0.85
RNF220Q5VTB9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF220Q5VTB9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
RNF220Q5VTB9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.35■□□□□ 0.85
RNF220Q5VTB9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 KRT16P3-201ENST00000439127 1283 ntBASIC20.34■□□□□ 0.85
RNF220Q5VTB9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF220Q5VTB9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF220Q5VTB9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF220Q5VTB9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF220Q5VTB9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF220Q5VTB9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RNF220Q5VTB9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF220Q5VTB9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF220Q5VTB9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF220Q5VTB9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF220Q5VTB9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RNF220Q5VTB9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
RNF220Q5VTB9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF220Q5VTB9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF220Q5VTB9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF220Q5VTB9 AC087742.1-201ENST00000575880 1738 ntBASIC20.32■□□□□ 0.84
RNF220Q5VTB9 AC244015.2-201ENST00000616358 1861 ntBASIC20.32■□□□□ 0.84
RNF220Q5VTB9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms