Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSL3PQ5NE16 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTSL3PQ5NE16 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTSL3PQ5NE16 NT5C3AP1-201ENST00000394500 1012 ntBASIC21■□□□□ 0.95
CTSL3PQ5NE16 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTSL3PQ5NE16 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTSL3PQ5NE16 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTSL3PQ5NE16 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CTSL3PQ5NE16 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 AL137060.1-201ENST00000618151 2648 ntBASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.99■□□□□ 0.95
CTSL3PQ5NE16 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTSL3PQ5NE16 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 ZNRF2P3-201ENST00000424200 374 ntBASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.97■□□□□ 0.95
CTSL3PQ5NE16 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSL3PQ5NE16 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSL3PQ5NE16 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CTSL3PQ5NE16 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSL3PQ5NE16 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSL3PQ5NE16 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.95■□□□□ 0.94
CTSL3PQ5NE16 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.95■□□□□ 0.94
CTSL3PQ5NE16 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.95■□□□□ 0.94
CTSL3PQ5NE16 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSL3PQ5NE16 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
CTSL3PQ5NE16 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms