Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC026471.6-201ENST00000622954 1905 ntBASIC24.49■■□□□ 1.51
USH1GQ495M9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
USH1GQ495M9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
USH1GQ495M9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
USH1GQ495M9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
USH1GQ495M9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
USH1GQ495M9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
USH1GQ495M9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
USH1GQ495M9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
USH1GQ495M9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
USH1GQ495M9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.48■■□□□ 1.51
USH1GQ495M9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.48■■□□□ 1.51
USH1GQ495M9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.48■■□□□ 1.51
USH1GQ495M9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.47■■□□□ 1.51
USH1GQ495M9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
USH1GQ495M9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
USH1GQ495M9 AC026185.1-201ENST00000445748 174 ntBASIC24.47■■□□□ 1.51
USH1GQ495M9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.47■■□□□ 1.51
USH1GQ495M9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
USH1GQ495M9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.47■■□□□ 1.51
USH1GQ495M9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USH1GQ495M9 MYCNOS-205ENST00000641950 531 ntBASIC24.47■■□□□ 1.51
USH1GQ495M9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USH1GQ495M9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.46■■□□□ 1.51
USH1GQ495M9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USH1GQ495M9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USH1GQ495M9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USH1GQ495M9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.46■■□□□ 1.51
USH1GQ495M9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.46■■□□□ 1.51
USH1GQ495M9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.46■■□□□ 1.51
USH1GQ495M9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
USH1GQ495M9 AC053503.5-201ENST00000601508 636 ntBASIC24.46■■□□□ 1.51
USH1GQ495M9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
USH1GQ495M9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USH1GQ495M9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.46■■□□□ 1.51
USH1GQ495M9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.46■■□□□ 1.51
USH1GQ495M9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
USH1GQ495M9 AC068473.5-201ENST00000616428 2072 ntBASIC24.46■■□□□ 1.51
USH1GQ495M9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
USH1GQ495M9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
USH1GQ495M9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
USH1GQ495M9 AC003102.1-202ENST00000563394 1796 ntBASIC24.45■■□□□ 1.5
USH1GQ495M9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
USH1GQ495M9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.45■■□□□ 1.5
USH1GQ495M9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
USH1GQ495M9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.45■■□□□ 1.5
USH1GQ495M9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.45■■□□□ 1.5
USH1GQ495M9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.45■■□□□ 1.5
USH1GQ495M9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.45■■□□□ 1.5
USH1GQ495M9 AC233723.2-201ENST00000623798 2106 ntBASIC24.45■■□□□ 1.5
USH1GQ495M9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USH1GQ495M9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
USH1GQ495M9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
USH1GQ495M9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USH1GQ495M9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.45■■□□□ 1.5
USH1GQ495M9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USH1GQ495M9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.44■■□□□ 1.5
USH1GQ495M9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USH1GQ495M9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
USH1GQ495M9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USH1GQ495M9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
USH1GQ495M9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USH1GQ495M9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USH1GQ495M9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.44■■□□□ 1.5
USH1GQ495M9 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.44■■□□□ 1.5
USH1GQ495M9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USH1GQ495M9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
USH1GQ495M9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.44■■□□□ 1.5
USH1GQ495M9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USH1GQ495M9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
USH1GQ495M9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.43■■□□□ 1.5
USH1GQ495M9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.43■■□□□ 1.5
USH1GQ495M9 ID1-201ENST00000376105 1233 ntBASIC24.43■■□□□ 1.5
USH1GQ495M9 CROCCP5-201ENST00000436658 830 ntBASIC24.43■■□□□ 1.5
USH1GQ495M9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.43■■□□□ 1.5
USH1GQ495M9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.43■■□□□ 1.5
USH1GQ495M9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.43■■□□□ 1.5
USH1GQ495M9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
USH1GQ495M9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
USH1GQ495M9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
USH1GQ495M9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.42■■□□□ 1.5
USH1GQ495M9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.42■■□□□ 1.5
USH1GQ495M9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.42■■□□□ 1.5
USH1GQ495M9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 SLC7A5P2-201ENST00000553010 536 ntBASIC24.42■■□□□ 1.5
USH1GQ495M9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
USH1GQ495M9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
USH1GQ495M9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
USH1GQ495M9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.41■■□□□ 1.5
USH1GQ495M9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.41■■□□□ 1.5
USH1GQ495M9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.41■■□□□ 1.5
USH1GQ495M9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms