Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AL024507.2-201ENST00000606070 2574 ntBASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRFAM7AQ494W8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRFAM7AQ494W8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 HLA-L-209ENST00000420110 1011 ntBASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 NTF6G-201ENST00000591094 616 ntBASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRFAM7AQ494W8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 AL354811.1-201ENST00000610286 706 ntBASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRFAM7AQ494W8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
CHRFAM7AQ494W8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 CCDC92B-201ENST00000575506 885 ntBASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 pRNA.6-201ENST00000610482 90 ntBASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 pRNA.5-201ENST00000612139 90 ntBASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 pRNA.11-201ENST00000618423 90 ntBASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 pRNA.13-201ENST00000619112 90 ntBASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 MIR6084-201ENST00000622012 110 ntBASIC18.46■□□□□ 0.55
CHRFAM7AQ494W8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms