Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX4Q33E94 RARRES2P1-201ENST00000474487 481 ntBASIC19.73■□□□□ 0.75
RFX4Q33E94 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RFX4Q33E94 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RFX4Q33E94 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RFX4Q33E94 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.73■□□□□ 0.75
RFX4Q33E94 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
RFX4Q33E94 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
RFX4Q33E94 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX4Q33E94 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RFX4Q33E94 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RFX4Q33E94 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX4Q33E94 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX4Q33E94 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX4Q33E94 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RFX4Q33E94 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX4Q33E94 TSPY9P-201ENST00000440215 945 ntBASIC19.72■□□□□ 0.75
RFX4Q33E94 TSPY11P-201ENST00000442607 1045 ntBASIC19.72■□□□□ 0.75
RFX4Q33E94 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.72■□□□□ 0.75
RFX4Q33E94 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX4Q33E94 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX4Q33E94 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RFX4Q33E94 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX4Q33E94 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX4Q33E94 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX4Q33E94 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RFX4Q33E94 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX4Q33E94 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.71■□□□□ 0.75
RFX4Q33E94 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.71■□□□□ 0.75
RFX4Q33E94 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RFX4Q33E94 AL499627.2-201ENST00000606283 725 ntBASIC19.71■□□□□ 0.75
RFX4Q33E94 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RFX4Q33E94 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX4Q33E94 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
RFX4Q33E94 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX4Q33E94 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RFX4Q33E94 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX4Q33E94 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX4Q33E94 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX4Q33E94 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX4Q33E94 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX4Q33E94 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX4Q33E94 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX4Q33E94 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.7■□□□□ 0.74
RFX4Q33E94 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX4Q33E94 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RFX4Q33E94 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RFX4Q33E94 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX4Q33E94 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.7■□□□□ 0.74
RFX4Q33E94 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RFX4Q33E94 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX4Q33E94 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RFX4Q33E94 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX4Q33E94 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX4Q33E94 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX4Q33E94 AC009299.2-201ENST00000482477 511 ntBASIC19.69■□□□□ 0.74
RFX4Q33E94 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
RFX4Q33E94 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFX4Q33E94 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RFX4Q33E94 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.69■□□□□ 0.74
RFX4Q33E94 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX4Q33E94 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX4Q33E94 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX4Q33E94 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX4Q33E94 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.68■□□□□ 0.74
RFX4Q33E94 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX4Q33E94 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX4Q33E94 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX4Q33E94 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX4Q33E94 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX4Q33E94 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX4Q33E94 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RFX4Q33E94 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX4Q33E94 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX4Q33E94 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX4Q33E94 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX4Q33E94 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RFX4Q33E94 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX4Q33E94 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX4Q33E94 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
RFX4Q33E94 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX4Q33E94 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX4Q33E94 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX4Q33E94 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX4Q33E94 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX4Q33E94 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
RFX4Q33E94 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX4Q33E94 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
RFX4Q33E94 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX4Q33E94 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX4Q33E94 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX4Q33E94 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX4Q33E94 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX4Q33E94 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RFX4Q33E94 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms