Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1EQ15878 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1EQ15878 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNA1EQ15878 RARRES2P4-201ENST00000514074 484 ntBASIC20.9■□□□□ 0.94
CACNA1EQ15878 AC142381.4-202ENST00000563973 229 ntBASIC20.9■□□□□ 0.94
CACNA1EQ15878 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1EQ15878 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.9■□□□□ 0.94
CACNA1EQ15878 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1EQ15878 RBM17P2-201ENST00000616397 1405 ntBASIC20.9■□□□□ 0.94
CACNA1EQ15878 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CACNA1EQ15878 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNA1EQ15878 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA1EQ15878 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CACNA1EQ15878 MIPEPP3-201ENST00000412105 444 ntBASIC20.89■□□□□ 0.94
CACNA1EQ15878 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.89■□□□□ 0.94
CACNA1EQ15878 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.89■□□□□ 0.94
CACNA1EQ15878 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CACNA1EQ15878 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.89■□□□□ 0.94
CACNA1EQ15878 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CACNA1EQ15878 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA1EQ15878 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA1EQ15878 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.89■□□□□ 0.93
CACNA1EQ15878 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.89■□□□□ 0.93
CACNA1EQ15878 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA1EQ15878 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.88■□□□□ 0.93
CACNA1EQ15878 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNA1EQ15878 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNA1EQ15878 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.88■□□□□ 0.93
CACNA1EQ15878 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.88■□□□□ 0.93
CACNA1EQ15878 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNA1EQ15878 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CACNA1EQ15878 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNA1EQ15878 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA1EQ15878 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CACNA1EQ15878 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.87■□□□□ 0.93
CACNA1EQ15878 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.87■□□□□ 0.93
CACNA1EQ15878 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.87■□□□□ 0.93
CACNA1EQ15878 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CACNA1EQ15878 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 AL158047.1-201ENST00000445918 881 ntBASIC20.87■□□□□ 0.93
CACNA1EQ15878 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.87■□□□□ 0.93
CACNA1EQ15878 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CACNA1EQ15878 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA1EQ15878 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA1EQ15878 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA1EQ15878 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA1EQ15878 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.86■□□□□ 0.93
CACNA1EQ15878 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.86■□□□□ 0.93
CACNA1EQ15878 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.86■□□□□ 0.93
CACNA1EQ15878 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
CACNA1EQ15878 AC053503.5-201ENST00000601508 636 ntBASIC20.86■□□□□ 0.93
CACNA1EQ15878 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA1EQ15878 AC093787.1-201ENST00000450396 207 ntBASIC20.86■□□□□ 0.93
CACNA1EQ15878 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.86■□□□□ 0.93
CACNA1EQ15878 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.85■□□□□ 0.93
CACNA1EQ15878 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.85■□□□□ 0.93
CACNA1EQ15878 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.85■□□□□ 0.93
CACNA1EQ15878 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CACNA1EQ15878 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.85■□□□□ 0.93
CACNA1EQ15878 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CACNA1EQ15878 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CACNA1EQ15878 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CACNA1EQ15878 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CACNA1EQ15878 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.84■□□□□ 0.93
CACNA1EQ15878 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CACNA1EQ15878 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.84■□□□□ 0.93
CACNA1EQ15878 AC008550.1-201ENST00000511500 884 ntBASIC20.84■□□□□ 0.93
CACNA1EQ15878 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CACNA1EQ15878 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CACNA1EQ15878 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CACNA1EQ15878 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CACNA1EQ15878 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CACNA1EQ15878 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.84■□□□□ 0.93
CACNA1EQ15878 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CACNA1EQ15878 AC008175.2-201ENST00000612840 297 ntBASIC20.84■□□□□ 0.93
CACNA1EQ15878 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.84■□□□□ 0.93
CACNA1EQ15878 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CACNA1EQ15878 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CACNA1EQ15878 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.83■□□□□ 0.93
CACNA1EQ15878 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CACNA1EQ15878 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms