Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 PEP1YBL017C 4740 nt1.94□□□□□ -2.1
VPS13Q07878 NRG1YDR043C 696 nt1.94□□□□□ -2.1
VPS13Q07878 BUD4YJR092W 4344 nt1.94□□□□□ -2.1
VPS13Q07878 SWC4YGR002C 1431 nt1.94□□□□□ -2.1
VPS13Q07878 RPS25AYGR027C 327 nt1.94□□□□□ -2.1
VPS13Q07878 YHR214C-EYHR214C-E 300 nt1.94□□□□□ -2.1
VPS13Q07878 YAR070CYAR070C 300 nt1.94□□□□□ -2.1
VPS13Q07878 MKK1YOR231W 1527 nt1.94□□□□□ -2.1
VPS13Q07878 SMP1YBR182C 1359 nt1.94□□□□□ -2.1
VPS13Q07878 APM3YBR288C 1452 nt1.94□□□□□ -2.1
VPS13Q07878 PPE1YHR075C 1203 nt1.93□□□□□ -2.1
VPS13Q07878 IKI1YHR187W 930 nt1.93□□□□□ -2.1
VPS13Q07878 YLR346CYLR346C 306 nt1.93□□□□□ -2.1
VPS13Q07878 YPL088WYPL088W 1029 nt1.93□□□□□ -2.1
VPS13Q07878 YDR239CYDR239C 2364 nt1.93□□□□□ -2.1
VPS13Q07878 SCH9YHR205W 2475 nt1.93□□□□□ -2.1
VPS13Q07878 PDC2YDR081C 2778 nt1.93□□□□□ -2.1
VPS13Q07878 YJL113WYJL113W 4647 nt1.92□□□□□ -2.1
VPS13Q07878 HOS1YPR068C 1413 nt1.92□□□□□ -2.1
VPS13Q07878 SKM1YOL113W 1968 nt1.92□□□□□ -2.1
VPS13Q07878 RBA50YDR527W 1320 nt1.92□□□□□ -2.1
VPS13Q07878 ARC19YKL013C 516 nt1.92□□□□□ -2.1
VPS13Q07878 YHC1YLR298C 696 nt1.92□□□□□ -2.1
VPS13Q07878 ECM13YBL043W 774 nt1.92□□□□□ -2.1
VPS13Q07878 REX4YOL080C 870 nt1.92□□□□□ -2.1
VPS13Q07878 YKR078WYKR078W 1758 nt1.92□□□□□ -2.1
VPS13Q07878 SEC28YIL076W 891 nt1.91□□□□□ -2.1
VPS13Q07878 SEF1YBL066C 3447 nt1.91□□□□□ -2.1
VPS13Q07878 TOR2YKL203C 7425 nt1.91□□□□□ -2.1
VPS13Q07878 PSY2YNL201C 2577 nt1.91□□□□□ -2.1
VPS13Q07878 RPO41YFL036W 4056 nt1.91□□□□□ -2.1
VPS13Q07878 DIT1YDR403W 1611 nt1.91□□□□□ -2.1
VPS13Q07878 CBP1YJL209W 1965 nt1.91□□□□□ -2.1
VPS13Q07878 YER172C-AYER172C-A 381 nt1.91□□□□□ -2.1
VPS13Q07878 TAF3YPL011C 1062 nt1.91□□□□□ -2.1
VPS13Q07878 BYE1YKL005C 1785 nt1.9□□□□□ -2.1
VPS13Q07878 NET1YJL076W 3570 nt1.9□□□□□ -2.1
VPS13Q07878 YMR018WYMR018W 1545 nt1.9□□□□□ -2.1
VPS13Q07878 YIG1YPL201C 1386 nt1.9□□□□□ -2.1
VPS13Q07878 ENP2YGR145W 2124 nt1.9□□□□□ -2.11
VPS13Q07878 MDS3YGL197W 4464 nt1.9□□□□□ -2.11
VPS13Q07878 RAD5YLR032W 3510 nt1.9□□□□□ -2.11
VPS13Q07878 TOP1YOL006C 2310 nt1.9□□□□□ -2.11
VPS13Q07878 USE1YGL098W 738 nt1.89□□□□□ -2.11
VPS13Q07878 CUS1YMR240C 1311 nt1.89□□□□□ -2.11
VPS13Q07878 GSM1YJL103C 1857 nt1.89□□□□□ -2.11
VPS13Q07878 RPN4YDL020C 1596 nt1.89□□□□□ -2.11
VPS13Q07878 SAP185YJL098W 3177 nt1.89□□□□□ -2.11
VPS13Q07878 ICR1ICR1 3199 nt1.89□□□□□ -2.11
VPS13Q07878 NCB2YDR397C 441 nt1.89□□□□□ -2.11
VPS13Q07878 RRP5YMR229C 5190 nt1.89□□□□□ -2.11
VPS13Q07878 CDC123YLR215C 1083 nt1.88□□□□□ -2.11
VPS13Q07878 BAR1YIL015W 1764 nt1.88□□□□□ -2.11
VPS13Q07878 RPN1YHR027C 2982 nt1.88□□□□□ -2.11
VPS13Q07878 GPB1YOR371C 2694 nt1.88□□□□□ -2.11
VPS13Q07878 NSA1YGL111W 1392 nt1.88□□□□□ -2.11
VPS13Q07878 BRE1YDL074C 2103 nt1.88□□□□□ -2.11
VPS13Q07878 YGR226CYGR226C 210 nt1.87□□□□□ -2.11
VPS13Q07878 VPS35YJL154C 2835 nt1.87□□□□□ -2.11
VPS13Q07878 TPO5YKL174C 1857 nt1.87□□□□□ -2.11
VPS13Q07878 POL2YNL262W 6669 nt1.87□□□□□ -2.11
VPS13Q07878 YOR114WYOR114W 885 nt1.87□□□□□ -2.11
VPS13Q07878 VPS54YDR027C 2670 nt1.87□□□□□ -2.11
VPS13Q07878 UFD4YKL010C 4452 nt1.87□□□□□ -2.11
VPS13Q07878 PSK2YOL045W 3306 nt1.86□□□□□ -2.11
VPS13Q07878 RTT102YGR275W 474 nt1.86□□□□□ -2.11
VPS13Q07878 PFD1YJL179W 330 nt1.86□□□□□ -2.11
VPS13Q07878 YCK3YER123W 1575 nt1.86□□□□□ -2.11
VPS13Q07878 YJR039WYJR039W 3366 nt1.86□□□□□ -2.11
VPS13Q07878 BET1YIL004C 429 nt1.86□□□□□ -2.11
VPS13Q07878 REC114YMR133W 1287 nt1.86□□□□□ -2.11
VPS13Q07878 TPT1YOL102C 693 nt1.86□□□□□ -2.11
VPS13Q07878 YPR146CYPR146C 330 nt1.86□□□□□ -2.11
VPS13Q07878 NDL1YLR254C 570 nt1.85□□□□□ -2.11
VPS13Q07878 RRP7YCL031C 894 nt1.85□□□□□ -2.11
VPS13Q07878 PFF1YBR074W 2931 nt1.85□□□□□ -2.11
VPS13Q07878 ALO1YML086C 1581 nt1.85□□□□□ -2.11
VPS13Q07878 HGH1YGR187C 1185 nt1.85□□□□□ -2.11
VPS13Q07878 MRPS9YBR146W 837 nt1.85□□□□□ -2.11
VPS13Q07878 TRM3YDL112W 4311 nt1.85□□□□□ -2.11
VPS13Q07878 MDM10YAL010C 1482 nt1.84□□□□□ -2.11
VPS13Q07878 YCR013CYCR013C 648 nt1.84□□□□□ -2.11
VPS13Q07878 CTF13YMR094W 1437 nt1.84□□□□□ -2.11
VPS13Q07878 SSF1YHR066W 1362 nt1.84□□□□□ -2.11
VPS13Q07878 MAK10YEL053C 2202 nt1.84□□□□□ -2.11
VPS13Q07878 HUL4YJR036C 2679 nt1.84□□□□□ -2.11
VPS13Q07878 MCD4YKL165C 2760 nt1.84□□□□□ -2.12
VPS13Q07878 MON2YNL297C 4911 nt1.84□□□□□ -2.12
VPS13Q07878 YER039C-AYER039C-A 219 nt1.84□□□□□ -2.12
VPS13Q07878 RTT10YPL183C 3042 nt1.83□□□□□ -2.12
VPS13Q07878 YLR001CYLR001C 2589 nt1.83□□□□□ -2.12
VPS13Q07878 YMR306C-AYMR306C-A 390 nt1.83□□□□□ -2.12
VPS13Q07878 MRPL27YBR282W 441 nt1.83□□□□□ -2.12
VPS13Q07878 PIK1YNL267W 3201 nt1.83□□□□□ -2.12
VPS13Q07878 BCK1YJL095W 4437 nt1.83□□□□□ -2.12
VPS13Q07878 THO1YER063W 657 nt1.82□□□□□ -2.12
VPS13Q07878 YOS1YER074W-A 258 nt1.82□□□□□ -2.12
VPS13Q07878 PBI1YPL272C 1554 nt1.82□□□□□ -2.12
VPS13Q07878 LRE1YCL051W 1752 nt1.82□□□□□ -2.12
VPS13Q07878 DGR1YNL130C-A 147 nt1.82□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 69.3 ms