Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCS1Q01581 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCS1Q01581 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCS1Q01581 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.47■□□□□ 0.87
HMGCS1Q01581 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.47■□□□□ 0.87
HMGCS1Q01581 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.47■□□□□ 0.87
HMGCS1Q01581 AC233992.3-201ENST00000607491 485 ntBASIC20.47■□□□□ 0.87
HMGCS1Q01581 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCS1Q01581 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HMGCS1Q01581 AL024507.2-201ENST00000606070 2574 ntBASIC20.47■□□□□ 0.87
HMGCS1Q01581 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCS1Q01581 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCS1Q01581 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCS1Q01581 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
HMGCS1Q01581 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HMGCS1Q01581 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.46■□□□□ 0.87
HMGCS1Q01581 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.46■□□□□ 0.87
HMGCS1Q01581 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.46■□□□□ 0.87
HMGCS1Q01581 AC133561.4-201ENST00000566112 224 ntBASIC20.46■□□□□ 0.87
HMGCS1Q01581 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.46■□□□□ 0.87
HMGCS1Q01581 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCS1Q01581 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HMGCS1Q01581 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HMGCS1Q01581 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HMGCS1Q01581 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGCS1Q01581 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 AC126544.1-201ENST00000580842 1059 ntBASIC20.45■□□□□ 0.86
HMGCS1Q01581 SMUG1P1-201ENST00000590640 811 ntBASIC20.45■□□□□ 0.86
HMGCS1Q01581 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGCS1Q01581 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCS1Q01581 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCS1Q01581 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 AC096631.2-201ENST00000436136 790 ntBASIC20.44■□□□□ 0.86
HMGCS1Q01581 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCS1Q01581 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCS1Q01581 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCS1Q01581 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCS1Q01581 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCS1Q01581 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCS1Q01581 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCS1Q01581 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
HMGCS1Q01581 AP006587.3-201ENST00000525742 1516 ntBASIC20.43■□□□□ 0.86
HMGCS1Q01581 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
HMGCS1Q01581 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCS1Q01581 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCS1Q01581 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
HMGCS1Q01581 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCS1Q01581 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCS1Q01581 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGCS1Q01581 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCS1Q01581 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGCS1Q01581 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HMGCS1Q01581 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCS1Q01581 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGCS1Q01581 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCS1Q01581 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGCS1Q01581 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HMGCS1Q01581 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCS1Q01581 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCS1Q01581 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCS1Q01581 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCS1Q01581 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCS1Q01581 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCS1Q01581 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
HMGCS1Q01581 AC008764.7-201ENST00000593779 1081 ntBASIC20.42■□□□□ 0.86
HMGCS1Q01581 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HMGCS1Q01581 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.42■□□□□ 0.86
HMGCS1Q01581 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCS1Q01581 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms