Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1BQ00975 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1BQ00975 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1BQ00975 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1BQ00975 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1BQ00975 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 AC060766.5-201ENST00000590539 871 ntBASIC19.94■□□□□ 0.78
CACNA1BQ00975 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1BQ00975 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1BQ00975 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1BQ00975 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1BQ00975 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1BQ00975 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CACNA1BQ00975 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1BQ00975 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1BQ00975 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1BQ00975 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CACNA1BQ00975 AC010980.2-201ENST00000587099 1412 ntBASIC19.93■□□□□ 0.78
CACNA1BQ00975 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1BQ00975 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1BQ00975 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CACNA1BQ00975 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNA1BQ00975 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1BQ00975 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.93■□□□□ 0.78
CACNA1BQ00975 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1BQ00975 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1BQ00975 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1BQ00975 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1BQ00975 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.92■□□□□ 0.78
CACNA1BQ00975 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1BQ00975 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
CACNA1BQ00975 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CACNA1BQ00975 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1BQ00975 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1BQ00975 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.92■□□□□ 0.78
CACNA1BQ00975 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CACNA1BQ00975 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CACNA1BQ00975 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.92■□□□□ 0.78
CACNA1BQ00975 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.92■□□□□ 0.78
CACNA1BQ00975 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1BQ00975 CRYGFP-201ENST00000418459 633 ntBASIC19.91■□□□□ 0.78
CACNA1BQ00975 DUX4L26-201ENST00000489078 1255 ntBASIC19.91■□□□□ 0.78
CACNA1BQ00975 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.91■□□□□ 0.78
CACNA1BQ00975 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.91■□□□□ 0.78
CACNA1BQ00975 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1BQ00975 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1BQ00975 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.91■□□□□ 0.78
CACNA1BQ00975 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.91■□□□□ 0.78
CACNA1BQ00975 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1BQ00975 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1BQ00975 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CACNA1BQ00975 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.91■□□□□ 0.78
CACNA1BQ00975 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.91■□□□□ 0.78
CACNA1BQ00975 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CACNA1BQ00975 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1BQ00975 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.9■□□□□ 0.78
CACNA1BQ00975 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CACNA1BQ00975 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1BQ00975 MIR6089-201ENST00000616698 64 ntBASIC19.9■□□□□ 0.78
CACNA1BQ00975 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1BQ00975 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1BQ00975 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.9■□□□□ 0.78
CACNA1BQ00975 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CACNA1BQ00975 AC010141.3-201ENST00000456659 717 ntBASIC19.9■□□□□ 0.78
CACNA1BQ00975 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.9■□□□□ 0.78
CACNA1BQ00975 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.9■□□□□ 0.78
CACNA1BQ00975 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CACNA1BQ00975 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.9■□□□□ 0.78
CACNA1BQ00975 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CACNA1BQ00975 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CACNA1BQ00975 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1BQ00975 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1BQ00975 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CACNA1BQ00975 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.89■□□□□ 0.77
CACNA1BQ00975 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.89■□□□□ 0.77
CACNA1BQ00975 PNMA6B-201ENST00000538162 1200 ntBASIC19.89■□□□□ 0.77
CACNA1BQ00975 AC005363.2-201ENST00000618631 242 ntBASIC19.89■□□□□ 0.77
CACNA1BQ00975 AL358472.4-201ENST00000633140 710 ntBASIC19.89■□□□□ 0.77
CACNA1BQ00975 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.89■□□□□ 0.77
CACNA1BQ00975 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CACNA1BQ00975 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1BQ00975 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1BQ00975 AC004687.1-201ENST00000579003 1625 ntBASIC19.88■□□□□ 0.77
CACNA1BQ00975 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CACNA1BQ00975 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1BQ00975 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.88■□□□□ 0.77
CACNA1BQ00975 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms