Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM6P62312 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM6P62312 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.7■□□□□ 0.58
LSM6P62312 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM6P62312 BX005040.4-201ENST00000637145 1518 ntBASIC18.69■□□□□ 0.58
LSM6P62312 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM6P62312 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
LSM6P62312 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 PKD1P6-201ENST00000343738 4769 ntBASIC18.69■□□□□ 0.58
LSM6P62312 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LSM6P62312 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM6P62312 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM6P62312 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.69■□□□□ 0.58
LSM6P62312 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM6P62312 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM6P62312 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM6P62312 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LSM6P62312 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
LSM6P62312 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM6P62312 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM6P62312 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM6P62312 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LSM6P62312 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
LSM6P62312 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.68■□□□□ 0.58
LSM6P62312 AC142381.2-201ENST00000566120 298 ntBASIC18.68■□□□□ 0.58
LSM6P62312 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
LSM6P62312 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LSM6P62312 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM6P62312 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSM6P62312 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM6P62312 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM6P62312 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.67■□□□□ 0.58
LSM6P62312 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM6P62312 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM6P62312 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM6P62312 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM6P62312 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.67■□□□□ 0.58
LSM6P62312 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
LSM6P62312 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM6P62312 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.67■□□□□ 0.58
LSM6P62312 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM6P62312 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM6P62312 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
LSM6P62312 AC055733.4-201ENST00000638462 1354 ntBASIC18.67■□□□□ 0.58
LSM6P62312 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
LSM6P62312 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM6P62312 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM6P62312 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.66■□□□□ 0.58
LSM6P62312 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM6P62312 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM6P62312 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM6P62312 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM6P62312 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM6P62312 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM6P62312 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM6P62312 AC012414.1-201ENST00000556676 535 ntBASIC18.66■□□□□ 0.58
LSM6P62312 AC005837.3-201ENST00000612163 286 ntBASIC18.66■□□□□ 0.58
LSM6P62312 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM6P62312 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LSM6P62312 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.66■□□□□ 0.58
LSM6P62312 AC005224.4-201ENST00000583262 1652 ntBASIC18.66■□□□□ 0.58
LSM6P62312 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LSM6P62312 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM6P62312 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
LSM6P62312 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.65■□□□□ 0.58
LSM6P62312 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.65■□□□□ 0.58
LSM6P62312 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.65■□□□□ 0.58
LSM6P62312 AL354811.1-201ENST00000610286 706 ntBASIC18.65■□□□□ 0.58
LSM6P62312 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.65■□□□□ 0.58
LSM6P62312 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.65■□□□□ 0.58
LSM6P62312 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM6P62312 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM6P62312 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LSM6P62312 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LSM6P62312 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LSM6P62312 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.64■□□□□ 0.57
LSM6P62312 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
LSM6P62312 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM6P62312 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms