Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM3P62310 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
LSM3P62310 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.14■□□□□ 0.66
LSM3P62310 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
LSM3P62310 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.14■□□□□ 0.66
LSM3P62310 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.14■□□□□ 0.66
LSM3P62310 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.14■□□□□ 0.65
LSM3P62310 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.14■□□□□ 0.65
LSM3P62310 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.14■□□□□ 0.65
LSM3P62310 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 LONRF2P2-201ENST00000439212 571 ntBASIC19.14■□□□□ 0.65
LSM3P62310 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.14■□□□□ 0.65
LSM3P62310 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LSM3P62310 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LSM3P62310 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM3P62310 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
LSM3P62310 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.13■□□□□ 0.65
LSM3P62310 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LSM3P62310 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.13■□□□□ 0.65
LSM3P62310 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM3P62310 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM3P62310 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LSM3P62310 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LSM3P62310 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LSM3P62310 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.13■□□□□ 0.65
LSM3P62310 CA15P2-201ENST00000611168 834 ntBASIC19.13■□□□□ 0.65
LSM3P62310 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.13■□□□□ 0.65
LSM3P62310 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM3P62310 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LSM3P62310 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.13■□□□□ 0.65
LSM3P62310 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.13■□□□□ 0.65
LSM3P62310 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM3P62310 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM3P62310 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LSM3P62310 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM3P62310 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.12■□□□□ 0.65
LSM3P62310 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM3P62310 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM3P62310 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.12■□□□□ 0.65
LSM3P62310 AC004448.1-201ENST00000458332 883 ntBASIC19.12■□□□□ 0.65
LSM3P62310 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LSM3P62310 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.12■□□□□ 0.65
LSM3P62310 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.12■□□□□ 0.65
LSM3P62310 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM3P62310 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.12■□□□□ 0.65
LSM3P62310 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM3P62310 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM3P62310 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LSM3P62310 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.12■□□□□ 0.65
LSM3P62310 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.12■□□□□ 0.65
LSM3P62310 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM3P62310 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM3P62310 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM3P62310 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LSM3P62310 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM3P62310 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM3P62310 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LSM3P62310 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LSM3P62310 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LSM3P62310 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LSM3P62310 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.11■□□□□ 0.65
LSM3P62310 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
LSM3P62310 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM3P62310 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.1■□□□□ 0.65
LSM3P62310 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.1■□□□□ 0.65
LSM3P62310 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LSM3P62310 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.1■□□□□ 0.65
LSM3P62310 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
LSM3P62310 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LSM3P62310 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.1■□□□□ 0.65
LSM3P62310 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LSM3P62310 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LSM3P62310 GABARAPL3-202ENST00000624044 1851 ntBASIC19.09■□□□□ 0.65
LSM3P62310 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM3P62310 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM3P62310 AC073314.1-201ENST00000568729 2216 ntBASIC19.09■□□□□ 0.65
LSM3P62310 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms