Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RPS3AP61247 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.84■□□□□ 0.77
RPS3AP61247 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPS3AP61247 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.83■□□□□ 0.77
RPS3AP61247 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS3AP61247 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
RPS3AP61247 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS3AP61247 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS3AP61247 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS3AP61247 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS3AP61247 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS3AP61247 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPS3AP61247 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.83■□□□□ 0.77
RPS3AP61247 SLC47A1P1-202ENST00000449666 945 ntBASIC19.83■□□□□ 0.77
RPS3AP61247 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.83■□□□□ 0.77
RPS3AP61247 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RPS3AP61247 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.83■□□□□ 0.76
RPS3AP61247 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPS3AP61247 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RPS3AP61247 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RPS3AP61247 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS3AP61247 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS3AP61247 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RPS3AP61247 AC105265.2-201ENST00000467189 838 ntBASIC19.82■□□□□ 0.76
RPS3AP61247 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPS3AP61247 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS3AP61247 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RPS3AP61247 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS3AP61247 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS3AP61247 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RPS3AP61247 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS3AP61247 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.82■□□□□ 0.76
RPS3AP61247 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RPS3AP61247 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS3AP61247 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPS3AP61247 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS3AP61247 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RPS3AP61247 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
RPS3AP61247 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.81■□□□□ 0.76
RPS3AP61247 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS3AP61247 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS3AP61247 AC004687.1-201ENST00000579003 1625 ntBASIC19.81■□□□□ 0.76
RPS3AP61247 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.81■□□□□ 0.76
RPS3AP61247 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPS3AP61247 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.81■□□□□ 0.76
RPS3AP61247 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS3AP61247 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPS3AP61247 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.81■□□□□ 0.76
RPS3AP61247 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS3AP61247 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS3AP61247 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
RPS3AP61247 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS3AP61247 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
RPS3AP61247 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS3AP61247 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RPS3AP61247 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS3AP61247 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS3AP61247 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.8■□□□□ 0.76
RPS3AP61247 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS3AP61247 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RPS3AP61247 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.8■□□□□ 0.76
RPS3AP61247 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS3AP61247 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.8■□□□□ 0.76
RPS3AP61247 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS3AP61247 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RPS3AP61247 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RPS3AP61247 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RPS3AP61247 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS3AP61247 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.79■□□□□ 0.76
RPS3AP61247 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.79■□□□□ 0.76
RPS3AP61247 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.79■□□□□ 0.76
RPS3AP61247 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.79■□□□□ 0.76
RPS3AP61247 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS3AP61247 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS3AP61247 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.79■□□□□ 0.76
RPS3AP61247 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RPS3AP61247 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RPS3AP61247 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS3AP61247 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS3AP61247 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPS3AP61247 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS3AP61247 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS3AP61247 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS3AP61247 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS3AP61247 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RPS3AP61247 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS3AP61247 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.78■□□□□ 0.76
RPS3AP61247 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS3AP61247 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RPS3AP61247 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.78■□□□□ 0.76
RPS3AP61247 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RPS3AP61247 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
RPS3AP61247 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS3AP61247 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS3AP61247 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.78■□□□□ 0.76
RPS3AP61247 FAM99A-202ENST00000538190 1989 ntBASIC19.77■□□□□ 0.76
RPS3AP61247 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RPS3AP61247 AC005229.4-201ENST00000610085 2198 ntBASIC19.77■□□□□ 0.76
RPS3AP61247 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms