Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2NP61088 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.69■□□□□ 0.58
UBE2NP61088 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UBE2NP61088 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE2NP61088 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.69■□□□□ 0.58
UBE2NP61088 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE2NP61088 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
UBE2NP61088 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE2NP61088 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE2NP61088 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE2NP61088 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE2NP61088 AL162430.1-201ENST00000480705 870 ntBASIC18.68■□□□□ 0.58
UBE2NP61088 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.68■□□□□ 0.58
UBE2NP61088 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
UBE2NP61088 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.68■□□□□ 0.58
UBE2NP61088 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE2NP61088 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE2NP61088 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE2NP61088 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 AC055733.4-201ENST00000638462 1354 ntBASIC18.68■□□□□ 0.58
UBE2NP61088 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE2NP61088 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2NP61088 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2NP61088 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2NP61088 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
UBE2NP61088 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2NP61088 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2NP61088 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2NP61088 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.67■□□□□ 0.58
UBE2NP61088 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.67■□□□□ 0.58
UBE2NP61088 NTF6G-201ENST00000591094 616 ntBASIC18.67■□□□□ 0.58
UBE2NP61088 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.67■□□□□ 0.58
UBE2NP61088 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2NP61088 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UBE2NP61088 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2NP61088 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2NP61088 KRT87P-202ENST00000534226 1464 ntBASIC18.66■□□□□ 0.58
UBE2NP61088 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2NP61088 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
UBE2NP61088 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2NP61088 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.66■□□□□ 0.58
UBE2NP61088 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.66■□□□□ 0.58
UBE2NP61088 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.66■□□□□ 0.58
UBE2NP61088 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2NP61088 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.66■□□□□ 0.58
UBE2NP61088 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.66■□□□□ 0.58
UBE2NP61088 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.66■□□□□ 0.58
UBE2NP61088 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2NP61088 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2NP61088 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2NP61088 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE2NP61088 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2NP61088 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2NP61088 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE2NP61088 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE2NP61088 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.65■□□□□ 0.58
UBE2NP61088 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UBE2NP61088 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UBE2NP61088 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UBE2NP61088 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE2NP61088 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE2NP61088 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE2NP61088 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE2NP61088 AL117328.2-201ENST00000624617 1940 ntBASIC18.64■□□□□ 0.58
UBE2NP61088 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.64■□□□□ 0.58
UBE2NP61088 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2NP61088 ECEL1P1-201ENST00000373592 1742 ntBASIC18.64■□□□□ 0.57
UBE2NP61088 KRT18P5-201ENST00000436075 1291 ntBASIC18.64■□□□□ 0.57
UBE2NP61088 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.64■□□□□ 0.57
UBE2NP61088 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.64■□□□□ 0.57
UBE2NP61088 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.64■□□□□ 0.57
UBE2NP61088 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
UBE2NP61088 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.64■□□□□ 0.57
UBE2NP61088 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.64■□□□□ 0.57
UBE2NP61088 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2NP61088 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2NP61088 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2NP61088 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2NP61088 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2NP61088 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2NP61088 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE2NP61088 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms