Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3P56703 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.14■□□□□ 0.81
WNT3P56703 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.14■□□□□ 0.81
WNT3P56703 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
WNT3P56703 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3P56703 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
WNT3P56703 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3P56703 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.14■□□□□ 0.81
WNT3P56703 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.13■□□□□ 0.81
WNT3P56703 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3P56703 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3P56703 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3P56703 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3P56703 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
WNT3P56703 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3P56703 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3P56703 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3P56703 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3P56703 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.13■□□□□ 0.81
WNT3P56703 AC008764.7-201ENST00000593779 1081 ntBASIC20.13■□□□□ 0.81
WNT3P56703 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
WNT3P56703 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.13■□□□□ 0.81
WNT3P56703 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3P56703 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3P56703 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3P56703 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
WNT3P56703 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3P56703 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
WNT3P56703 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3P56703 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
WNT3P56703 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
WNT3P56703 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.12■□□□□ 0.81
WNT3P56703 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3P56703 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
WNT3P56703 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
WNT3P56703 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.12■□□□□ 0.81
WNT3P56703 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3P56703 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
WNT3P56703 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3P56703 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
WNT3P56703 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3P56703 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
WNT3P56703 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3P56703 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.11■□□□□ 0.81
WNT3P56703 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
WNT3P56703 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.11■□□□□ 0.81
WNT3P56703 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.11■□□□□ 0.81
WNT3P56703 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3P56703 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.11■□□□□ 0.81
WNT3P56703 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.11■□□□□ 0.81
WNT3P56703 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3P56703 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
WNT3P56703 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.11■□□□□ 0.81
WNT3P56703 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3P56703 BX842568.3-201ENST00000418104 571 ntBASIC20.11■□□□□ 0.81
WNT3P56703 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.11■□□□□ 0.81
WNT3P56703 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.11■□□□□ 0.81
WNT3P56703 SMUG1P1-201ENST00000590640 811 ntBASIC20.11■□□□□ 0.81
WNT3P56703 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3P56703 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3P56703 AP006587.3-201ENST00000525742 1516 ntBASIC20.11■□□□□ 0.81
WNT3P56703 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
WNT3P56703 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.11■□□□□ 0.81
WNT3P56703 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.1■□□□□ 0.81
WNT3P56703 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.1■□□□□ 0.81
WNT3P56703 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
WNT3P56703 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
WNT3P56703 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3P56703 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3P56703 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3P56703 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3P56703 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.1■□□□□ 0.81
WNT3P56703 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
WNT3P56703 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.1■□□□□ 0.81
WNT3P56703 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.1■□□□□ 0.81
WNT3P56703 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
WNT3P56703 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3P56703 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3P56703 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
WNT3P56703 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
WNT3P56703 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
WNT3P56703 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3P56703 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3P56703 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3P56703 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.09■□□□□ 0.81
WNT3P56703 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3P56703 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.09■□□□□ 0.81
WNT3P56703 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.09■□□□□ 0.81
WNT3P56703 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
WNT3P56703 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
WNT3P56703 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.09■□□□□ 0.81
WNT3P56703 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3P56703 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.08■□□□□ 0.81
WNT3P56703 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3P56703 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3P56703 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.08■□□□□ 0.81
WNT3P56703 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
WNT3P56703 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3P56703 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
WNT3P56703 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms