Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH15P55291 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.75■□□□□ 0.75
CDH15P55291 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.75■□□□□ 0.75
CDH15P55291 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH15P55291 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH15P55291 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH15P55291 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDH15P55291 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH15P55291 AC019069.1-201ENST00000610008 1333 ntBASIC19.75■□□□□ 0.75
CDH15P55291 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH15P55291 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDH15P55291 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH15P55291 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
CDH15P55291 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.74■□□□□ 0.75
CDH15P55291 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH15P55291 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH15P55291 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH15P55291 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH15P55291 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH15P55291 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH15P55291 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH15P55291 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH15P55291 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDH15P55291 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH15P55291 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CDH15P55291 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH15P55291 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH15P55291 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH15P55291 UNC93B8-201ENST00000511903 705 ntBASIC19.73■□□□□ 0.75
CDH15P55291 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH15P55291 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDH15P55291 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDH15P55291 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH15P55291 AL020996.1-203ENST00000536896 2307 ntBASIC19.73■□□□□ 0.75
CDH15P55291 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH15P55291 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH15P55291 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH15P55291 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH15P55291 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.72■□□□□ 0.75
CDH15P55291 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH15P55291 KRT16P3-201ENST00000439127 1283 ntBASIC19.72■□□□□ 0.75
CDH15P55291 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDH15P55291 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH15P55291 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH15P55291 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH15P55291 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH15P55291 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH15P55291 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.72■□□□□ 0.75
CDH15P55291 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDH15P55291 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH15P55291 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 AC008406.3-201ENST00000620001 1374 ntBASIC19.71■□□□□ 0.75
CDH15P55291 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDH15P55291 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH15P55291 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CDH15P55291 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH15P55291 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.74
CDH15P55291 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH15P55291 AC021242.3-201ENST00000607598 1377 ntBASIC19.7■□□□□ 0.74
CDH15P55291 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH15P55291 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH15P55291 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH15P55291 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH15P55291 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH15P55291 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.7■□□□□ 0.74
CDH15P55291 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH15P55291 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDH15P55291 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH15P55291 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDH15P55291 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH15P55291 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH15P55291 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH15P55291 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDH15P55291 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH15P55291 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH15P55291 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH15P55291 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms