Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDH12P55289 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH12P55289 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDH12P55289 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH12P55289 OR2I1P-207ENST00000453522 948 ntBASIC19.78■□□□□ 0.76
CDH12P55289 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH12P55289 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CDH12P55289 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH12P55289 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH12P55289 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH12P55289 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH12P55289 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH12P55289 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH12P55289 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH12P55289 AC104564.3-201ENST00000582367 638 ntBASIC19.77■□□□□ 0.76
CDH12P55289 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH12P55289 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH12P55289 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CDH12P55289 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDH12P55289 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CDH12P55289 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH12P55289 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH12P55289 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
CDH12P55289 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH12P55289 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH12P55289 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDH12P55289 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH12P55289 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH12P55289 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH12P55289 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.76■□□□□ 0.75
CDH12P55289 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH12P55289 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH12P55289 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH12P55289 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDH12P55289 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH12P55289 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH12P55289 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH12P55289 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH12P55289 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDH12P55289 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDH12P55289 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH12P55289 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH12P55289 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH12P55289 AL157384.1-201ENST00000445995 2473 ntBASIC19.75■□□□□ 0.75
CDH12P55289 SERBP1P1-201ENST00000396021 1160 ntBASIC19.75■□□□□ 0.75
CDH12P55289 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH12P55289 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH12P55289 AC068587.7-201ENST00000641602 218 ntBASIC19.75■□□□□ 0.75
CDH12P55289 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH12P55289 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH12P55289 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH12P55289 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH12P55289 SYT6-210ENST00000641643 1587 ntBASIC19.74■□□□□ 0.75
CDH12P55289 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH12P55289 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH12P55289 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH12P55289 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH12P55289 AC010525.1-201ENST00000585559 441 ntBASIC19.74■□□□□ 0.75
CDH12P55289 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.74■□□□□ 0.75
CDH12P55289 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH12P55289 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CDH12P55289 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH12P55289 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDH12P55289 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH12P55289 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH12P55289 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH12P55289 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH12P55289 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH12P55289 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH12P55289 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH12P55289 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDH12P55289 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDH12P55289 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH12P55289 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
CDH12P55289 AC131281.2-201ENST00000520478 145 ntBASIC19.73■□□□□ 0.75
CDH12P55289 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH12P55289 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH12P55289 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH12P55289 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CDH12P55289 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH12P55289 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH12P55289 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDH12P55289 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH12P55289 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH12P55289 DUX4L19-201ENST00000557448 1267 ntBASIC19.72■□□□□ 0.75
CDH12P55289 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH12P55289 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH12P55289 AL138724.1-201ENST00000606771 1088 ntBASIC19.72■□□□□ 0.75
CDH12P55289 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH12P55289 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH12P55289 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH12P55289 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH12P55289 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH12P55289 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDH12P55289 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.71■□□□□ 0.75
CDH12P55289 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH12P55289 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH12P55289 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH12P55289 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH12P55289 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms