Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH11P55287 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDH11P55287 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH11P55287 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH11P55287 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH11P55287 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDH11P55287 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CDH11P55287 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH11P55287 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH11P55287 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CDH11P55287 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH11P55287 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH11P55287 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH11P55287 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH11P55287 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH11P55287 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH11P55287 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH11P55287 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH11P55287 AC136469.2-201ENST00000623944 1028 ntBASIC19.4■□□□□ 0.7
CDH11P55287 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CDH11P55287 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH11P55287 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH11P55287 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH11P55287 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH11P55287 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH11P55287 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CDH11P55287 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH11P55287 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH11P55287 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.39■□□□□ 0.7
CDH11P55287 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.39■□□□□ 0.7
CDH11P55287 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDH11P55287 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH11P55287 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CDH11P55287 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH11P55287 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH11P55287 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH11P55287 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH11P55287 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH11P55287 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH11P55287 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDH11P55287 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH11P55287 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH11P55287 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH11P55287 FEM1AP4-201ENST00000443167 1987 ntBASIC19.39■□□□□ 0.69
CDH11P55287 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH11P55287 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH11P55287 AF106564.1-201ENST00000607058 2553 ntBASIC19.39■□□□□ 0.69
CDH11P55287 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH11P55287 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDH11P55287 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH11P55287 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDH11P55287 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH11P55287 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH11P55287 MIR3181-201ENST00000578512 73 ntBASIC19.38■□□□□ 0.69
CDH11P55287 AC008764.7-201ENST00000593779 1081 ntBASIC19.38■□□□□ 0.69
CDH11P55287 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.38■□□□□ 0.69
CDH11P55287 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH11P55287 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH11P55287 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH11P55287 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH11P55287 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CDH11P55287 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH11P55287 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH11P55287 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH11P55287 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH11P55287 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH11P55287 pRNA.6-201ENST00000610482 90 ntBASIC19.37■□□□□ 0.69
CDH11P55287 pRNA.5-201ENST00000612139 90 ntBASIC19.37■□□□□ 0.69
CDH11P55287 pRNA.11-201ENST00000618423 90 ntBASIC19.37■□□□□ 0.69
CDH11P55287 pRNA.13-201ENST00000619112 90 ntBASIC19.37■□□□□ 0.69
CDH11P55287 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH11P55287 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH11P55287 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDH11P55287 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH11P55287 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH11P55287 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH11P55287 RASA4CP-201ENST00000424092 1398 ntBASIC19.36■□□□□ 0.69
CDH11P55287 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms