Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA4P54764 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
EPHA4P54764 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.54■□□□□ 0.88
EPHA4P54764 MIR663A-201ENST00000385250 93 ntBASIC20.54■□□□□ 0.88
EPHA4P54764 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA4P54764 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHA4P54764 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
EPHA4P54764 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHA4P54764 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA4P54764 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHA4P54764 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
EPHA4P54764 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHA4P54764 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHA4P54764 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.54■□□□□ 0.88
EPHA4P54764 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHA4P54764 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
EPHA4P54764 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
EPHA4P54764 AC007322.1-201ENST00000426983 750 ntBASIC20.53■□□□□ 0.88
EPHA4P54764 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.53■□□□□ 0.88
EPHA4P54764 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.53■□□□□ 0.88
EPHA4P54764 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
EPHA4P54764 AC127496.7-201ENST00000625110 1798 ntBASIC20.53■□□□□ 0.88
EPHA4P54764 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
EPHA4P54764 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHA4P54764 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA4P54764 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA4P54764 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.52■□□□□ 0.88
EPHA4P54764 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.52■□□□□ 0.88
EPHA4P54764 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA4P54764 NCF1B-203ENST00000435988 1254 ntBASIC20.52■□□□□ 0.88
EPHA4P54764 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA4P54764 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
EPHA4P54764 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.52■□□□□ 0.88
EPHA4P54764 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
EPHA4P54764 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.52■□□□□ 0.88
EPHA4P54764 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
EPHA4P54764 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA4P54764 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EPHA4P54764 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
EPHA4P54764 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.52■□□□□ 0.87
EPHA4P54764 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA4P54764 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
EPHA4P54764 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.51■□□□□ 0.87
EPHA4P54764 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA4P54764 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA4P54764 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA4P54764 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA4P54764 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA4P54764 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.51■□□□□ 0.87
EPHA4P54764 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.51■□□□□ 0.87
EPHA4P54764 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
EPHA4P54764 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.51■□□□□ 0.87
EPHA4P54764 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHA4P54764 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHA4P54764 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.51■□□□□ 0.87
EPHA4P54764 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHA4P54764 AC008175.2-201ENST00000612840 297 ntBASIC20.51■□□□□ 0.87
EPHA4P54764 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA4P54764 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.51■□□□□ 0.87
EPHA4P54764 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA4P54764 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EPHA4P54764 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EPHA4P54764 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA4P54764 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHA4P54764 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA4P54764 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA4P54764 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA4P54764 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA4P54764 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHA4P54764 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.5■□□□□ 0.87
EPHA4P54764 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
EPHA4P54764 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.5■□□□□ 0.87
EPHA4P54764 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHA4P54764 AC010536.3-201ENST00000620306 533 ntBASIC20.5■□□□□ 0.87
EPHA4P54764 AC120498.10-201ENST00000621827 505 ntBASIC20.5■□□□□ 0.87
EPHA4P54764 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA4P54764 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
EPHA4P54764 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHA4P54764 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHA4P54764 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.5■□□□□ 0.87
EPHA4P54764 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.5■□□□□ 0.87
EPHA4P54764 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
EPHA4P54764 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHA4P54764 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHA4P54764 POU5F1P4-201ENST00000413175 1085 ntBASIC20.49■□□□□ 0.87
EPHA4P54764 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.49■□□□□ 0.87
EPHA4P54764 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EPHA4P54764 AC104771.1-201ENST00000603335 964 ntBASIC20.49■□□□□ 0.87
EPHA4P54764 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms