Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.06■■□□□ 1.76
PDE1AP54750 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDE1AP54750 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDE1AP54750 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PDE1AP54750 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.06■■□□□ 1.76
PDE1AP54750 MIR6084-201ENST00000622012 110 ntBASIC26.06■■□□□ 1.76
PDE1AP54750 AL358852.1-201ENST00000623174 1268 ntBASIC26.06■■□□□ 1.76
PDE1AP54750 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
PDE1AP54750 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.06■■□□□ 1.76
PDE1AP54750 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.05■■□□□ 1.76
PDE1AP54750 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDE1AP54750 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.05■■□□□ 1.76
PDE1AP54750 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDE1AP54750 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.05■■□□□ 1.76
PDE1AP54750 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
PDE1AP54750 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDE1AP54750 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDE1AP54750 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDE1AP54750 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDE1AP54750 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC26.04■■□□□ 1.76
PDE1AP54750 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26.04■■□□□ 1.76
PDE1AP54750 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDE1AP54750 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDE1AP54750 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
PDE1AP54750 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDE1AP54750 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDE1AP54750 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDE1AP54750 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
PDE1AP54750 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDE1AP54750 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDE1AP54750 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
PDE1AP54750 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26.03■■□□□ 1.76
PDE1AP54750 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDE1AP54750 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.03■■□□□ 1.76
PDE1AP54750 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.03■■□□□ 1.76
PDE1AP54750 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.02■■□□□ 1.76
PDE1AP54750 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.02■■□□□ 1.76
PDE1AP54750 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.02■■□□□ 1.76
PDE1AP54750 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PDE1AP54750 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.02■■□□□ 1.76
PDE1AP54750 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE1AP54750 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.01■■□□□ 1.76
PDE1AP54750 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.76
PDE1AP54750 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDE1AP54750 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDE1AP54750 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PDE1AP54750 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PDE1AP54750 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.01■■□□□ 1.75
PDE1AP54750 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.01■■□□□ 1.75
PDE1AP54750 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.01■■□□□ 1.75
PDE1AP54750 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDE1AP54750 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDE1AP54750 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
PDE1AP54750 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDE1AP54750 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
PDE1AP54750 NME4-202ENST00000382940 766 ntTSL 3 BASIC26■■□□□ 1.75
PDE1AP54750 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26■■□□□ 1.75
PDE1AP54750 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
PDE1AP54750 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26■■□□□ 1.75
PDE1AP54750 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDE1AP54750 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDE1AP54750 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDE1AP54750 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
PDE1AP54750 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE1AP54750 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.99■■□□□ 1.75
PDE1AP54750 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.99■■□□□ 1.75
PDE1AP54750 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.99■■□□□ 1.75
PDE1AP54750 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE1AP54750 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
PDE1AP54750 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
PDE1AP54750 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.99■■□□□ 1.75
PDE1AP54750 FEM1AP4-201ENST00000443167 1987 ntBASIC25.99■■□□□ 1.75
PDE1AP54750 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE1AP54750 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.99■■□□□ 1.75
PDE1AP54750 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PDE1AP54750 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PDE1AP54750 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.99■■□□□ 1.75
PDE1AP54750 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE1AP54750 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PDE1AP54750 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDE1AP54750 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.98■■□□□ 1.75
PDE1AP54750 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDE1AP54750 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDE1AP54750 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
PDE1AP54750 AC005229.4-201ENST00000610085 2198 ntBASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms