Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.04■□□□□ 0.96
CLNS1AP54105 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLNS1AP54105 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.04■□□□□ 0.96
CLNS1AP54105 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CLNS1AP54105 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLNS1AP54105 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.04■□□□□ 0.96
CLNS1AP54105 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLNS1AP54105 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.03■□□□□ 0.96
CLNS1AP54105 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.03■□□□□ 0.96
CLNS1AP54105 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.03■□□□□ 0.96
CLNS1AP54105 DUX4L4-201ENST00000566884 1269 ntBASIC21.03■□□□□ 0.96
CLNS1AP54105 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLNS1AP54105 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.03■□□□□ 0.96
CLNS1AP54105 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.03■□□□□ 0.96
CLNS1AP54105 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.03■□□□□ 0.96
CLNS1AP54105 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLNS1AP54105 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.03■□□□□ 0.96
CLNS1AP54105 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CLNS1AP54105 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.03■□□□□ 0.96
CLNS1AP54105 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CLNS1AP54105 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLNS1AP54105 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.03■□□□□ 0.96
CLNS1AP54105 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLNS1AP54105 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.03■□□□□ 0.96
CLNS1AP54105 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLNS1AP54105 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.02■□□□□ 0.96
CLNS1AP54105 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.02■□□□□ 0.96
CLNS1AP54105 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CLNS1AP54105 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.02■□□□□ 0.96
CLNS1AP54105 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.02■□□□□ 0.96
CLNS1AP54105 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.02■□□□□ 0.96
CLNS1AP54105 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CLNS1AP54105 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CLNS1AP54105 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CLNS1AP54105 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLNS1AP54105 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLNS1AP54105 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLNS1AP54105 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.02■□□□□ 0.95
CLNS1AP54105 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLNS1AP54105 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
CLNS1AP54105 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLNS1AP54105 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLNS1AP54105 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLNS1AP54105 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLNS1AP54105 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLNS1AP54105 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.01■□□□□ 0.95
CLNS1AP54105 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.01■□□□□ 0.95
CLNS1AP54105 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.01■□□□□ 0.95
CLNS1AP54105 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLNS1AP54105 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLNS1AP54105 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLNS1AP54105 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLNS1AP54105 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLNS1AP54105 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.01■□□□□ 0.95
CLNS1AP54105 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLNS1AP54105 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21■□□□□ 0.95
CLNS1AP54105 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLNS1AP54105 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLNS1AP54105 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLNS1AP54105 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CLNS1AP54105 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CLNS1AP54105 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLNS1AP54105 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21■□□□□ 0.95
CLNS1AP54105 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLNS1AP54105 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21■□□□□ 0.95
CLNS1AP54105 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLNS1AP54105 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLNS1AP54105 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21■□□□□ 0.95
CLNS1AP54105 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLNS1AP54105 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.99■□□□□ 0.95
CLNS1AP54105 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.99■□□□□ 0.95
CLNS1AP54105 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLNS1AP54105 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms