Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB28P51157 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB28P51157 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB28P51157 AC010542.4-201ENST00000563151 1910 ntBASIC20.59■□□□□ 0.89
RAB28P51157 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB28P51157 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RAB28P51157 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB28P51157 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB28P51157 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB28P51157 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB28P51157 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB28P51157 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.58■□□□□ 0.89
RAB28P51157 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAB28P51157 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAB28P51157 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RAB28P51157 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.58■□□□□ 0.88
RAB28P51157 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB28P51157 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB28P51157 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RAB28P51157 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB28P51157 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB28P51157 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB28P51157 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RAB28P51157 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.57■□□□□ 0.88
RAB28P51157 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB28P51157 EEF1DP3-203ENST00000566025 782 ntBASIC20.57■□□□□ 0.88
RAB28P51157 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB28P51157 KRT18P61-201ENST00000585825 1298 ntBASIC20.57■□□□□ 0.88
RAB28P51157 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB28P51157 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RAB28P51157 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB28P51157 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
RAB28P51157 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RAB28P51157 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB28P51157 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RAB28P51157 KRT19P1-201ENST00000405746 1186 ntBASIC20.56■□□□□ 0.88
RAB28P51157 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB28P51157 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB28P51157 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.56■□□□□ 0.88
RAB28P51157 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
RAB28P51157 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB28P51157 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.56■□□□□ 0.88
RAB28P51157 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
RAB28P51157 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RAB28P51157 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB28P51157 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB28P51157 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.55■□□□□ 0.88
RAB28P51157 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB28P51157 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RAB28P51157 AC104564.3-201ENST00000582367 638 ntBASIC20.55■□□□□ 0.88
RAB28P51157 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
RAB28P51157 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 AC053503.5-201ENST00000601508 636 ntBASIC20.55■□□□□ 0.88
RAB28P51157 AC104187.1-201ENST00000607510 612 ntBASIC20.55■□□□□ 0.88
RAB28P51157 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB28P51157 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB28P51157 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB28P51157 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB28P51157 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB28P51157 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RAB28P51157 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB28P51157 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB28P51157 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB28P51157 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB28P51157 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB28P51157 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAB28P51157 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB28P51157 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB28P51157 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB28P51157 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB28P51157 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB28P51157 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAB28P51157 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB28P51157 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RAB28P51157 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.53■□□□□ 0.88
RAB28P51157 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RAB28P51157 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB28P51157 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB28P51157 AC092666.2-201ENST00000613287 246 ntBASIC20.53■□□□□ 0.88
RAB28P51157 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB28P51157 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB28P51157 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB28P51157 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB28P51157 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB28P51157 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB28P51157 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB28P51157 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB28P51157 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB28P51157 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB28P51157 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB28P51157 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms