Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK1P49759 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK1P49759 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.85■□□□□ 0.77
CLK1P49759 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK1P49759 UNC93B3-201ENST00000308076 687 ntBASIC19.85■□□□□ 0.77
CLK1P49759 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK1P49759 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.85■□□□□ 0.77
CLK1P49759 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLK1P49759 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK1P49759 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK1P49759 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLK1P49759 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK1P49759 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.85■□□□□ 0.77
CLK1P49759 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLK1P49759 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK1P49759 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK1P49759 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK1P49759 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK1P49759 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK1P49759 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLK1P49759 OR2I1P-207ENST00000453522 948 ntBASIC19.84■□□□□ 0.77
CLK1P49759 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK1P49759 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLK1P49759 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK1P49759 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK1P49759 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK1P49759 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLK1P49759 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK1P49759 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK1P49759 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CLK1P49759 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.83■□□□□ 0.77
CLK1P49759 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK1P49759 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.83■□□□□ 0.77
CLK1P49759 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK1P49759 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.83■□□□□ 0.77
CLK1P49759 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK1P49759 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLK1P49759 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.83■□□□□ 0.77
CLK1P49759 AC068587.7-201ENST00000641602 218 ntBASIC19.83■□□□□ 0.77
CLK1P49759 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CLK1P49759 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK1P49759 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK1P49759 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.83■□□□□ 0.76
CLK1P49759 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK1P49759 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.83■□□□□ 0.76
CLK1P49759 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.83■□□□□ 0.76
CLK1P49759 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK1P49759 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLK1P49759 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.83■□□□□ 0.76
CLK1P49759 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.82■□□□□ 0.76
CLK1P49759 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLK1P49759 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.82■□□□□ 0.76
CLK1P49759 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.82■□□□□ 0.76
CLK1P49759 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.82■□□□□ 0.76
CLK1P49759 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.82■□□□□ 0.76
CLK1P49759 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.82■□□□□ 0.76
CLK1P49759 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.82■□□□□ 0.76
CLK1P49759 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.82■□□□□ 0.76
CLK1P49759 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CLK1P49759 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK1P49759 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLK1P49759 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.81■□□□□ 0.76
CLK1P49759 AL136162.1-201ENST00000607711 1078 ntBASIC19.81■□□□□ 0.76
CLK1P49759 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.81■□□□□ 0.76
CLK1P49759 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLK1P49759 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.81■□□□□ 0.76
CLK1P49759 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CLK1P49759 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.8■□□□□ 0.76
CLK1P49759 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK1P49759 AC135279.3-201ENST00000610945 1311 ntBASIC19.8■□□□□ 0.76
CLK1P49759 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK1P49759 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK1P49759 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK1P49759 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK1P49759 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK1P49759 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK1P49759 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.8■□□□□ 0.76
CLK1P49759 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLK1P49759 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms