Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CENPAP49450 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.18■□□□□ 0.66
CENPAP49450 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.18■□□□□ 0.66
CENPAP49450 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.18■□□□□ 0.66
CENPAP49450 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 SERBP1P1-201ENST00000396021 1160 ntBASIC19.18■□□□□ 0.66
CENPAP49450 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.18■□□□□ 0.66
CENPAP49450 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CENPAP49450 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CENPAP49450 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.18■□□□□ 0.66
CENPAP49450 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CENPAP49450 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPAP49450 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CENPAP49450 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CENPAP49450 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CENPAP49450 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPAP49450 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.17■□□□□ 0.66
CENPAP49450 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPAP49450 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 AC131281.2-201ENST00000520478 145 ntBASIC19.17■□□□□ 0.66
CENPAP49450 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.17■□□□□ 0.66
CENPAP49450 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.17■□□□□ 0.66
CENPAP49450 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPAP49450 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CENPAP49450 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CENPAP49450 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CENPAP49450 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CENPAP49450 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPAP49450 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CENPAP49450 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.17■□□□□ 0.66
CENPAP49450 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CENPAP49450 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CENPAP49450 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPAP49450 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.16■□□□□ 0.66
CENPAP49450 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.16■□□□□ 0.66
CENPAP49450 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.16■□□□□ 0.66
CENPAP49450 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CENPAP49450 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.16■□□□□ 0.66
CENPAP49450 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CENPAP49450 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPAP49450 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CENPAP49450 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPAP49450 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPAP49450 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPAP49450 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CENPAP49450 AC010141.3-201ENST00000456659 717 ntBASIC19.15■□□□□ 0.66
CENPAP49450 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CENPAP49450 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CENPAP49450 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CENPAP49450 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPAP49450 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CENPAP49450 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.15■□□□□ 0.66
CENPAP49450 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CENPAP49450 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CENPAP49450 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.15■□□□□ 0.66
CENPAP49450 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CENPAP49450 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CENPAP49450 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.14■□□□□ 0.65
CENPAP49450 AL136116.3-201ENST00000402907 1138 ntBASIC19.14■□□□□ 0.65
CENPAP49450 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.14■□□□□ 0.65
CENPAP49450 AL138724.1-201ENST00000606771 1088 ntBASIC19.14■□□□□ 0.65
CENPAP49450 AC131212.1-201ENST00000613771 668 ntBASIC19.14■□□□□ 0.65
CENPAP49450 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.14■□□□□ 0.65
CENPAP49450 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CENPAP49450 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.14■□□□□ 0.65
CENPAP49450 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CENPAP49450 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CENPAP49450 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CENPAP49450 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.14■□□□□ 0.65
CENPAP49450 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms