Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YBR238CYBR238C 2196 nt2□□□□□ -2.09
VPS55P47111 YDR034C-DYDR034C-D 5313 nt2□□□□□ -2.09
VPS55P47111 YDR210W-BYDR210W-B 5313 nt2□□□□□ -2.09
VPS55P47111 YLR410W-BYLR410W-B 5313 nt2□□□□□ -2.09
VPS55P47111 SEC15YGL233W 2733 nt2□□□□□ -2.09
VPS55P47111 YDR239CYDR239C 2364 nt2□□□□□ -2.09
VPS55P47111 CLB3YDL155W 1284 nt2□□□□□ -2.09
VPS55P47111 YDR250CYDR250C 276 nt2□□□□□ -2.09
VPS55P47111 YER079C-AYER079C-A 339 nt2□□□□□ -2.09
VPS55P47111 SDP1YIL113W 630 nt2□□□□□ -2.09
VPS55P47111 AIM25YJR100C 984 nt2□□□□□ -2.09
VPS55P47111 BUR2YLR226W 1188 nt2□□□□□ -2.09
VPS55P47111 snR43snR43 209 nt2□□□□□ -2.09
VPS55P47111 RTT10YPL183C 3042 nt2□□□□□ -2.09
VPS55P47111 ARG2YJL071W 1725 nt2□□□□□ -2.09
VPS55P47111 MYO5YMR109W 3660 nt1.99□□□□□ -2.09
VPS55P47111 MGA1YGR249W 1371 nt1.99□□□□□ -2.09
VPS55P47111 PRE1YER012W 597 nt1.99□□□□□ -2.09
VPS55P47111 EMC6YLL014W 327 nt1.99□□□□□ -2.09
VPS55P47111 SSN8YNL025C 972 nt1.99□□□□□ -2.09
VPS55P47111 RRD2YPL152W 1077 nt1.99□□□□□ -2.09
VPS55P47111 PRE2YPR103W 864 nt1.99□□□□□ -2.09
VPS55P47111 PDR1YGL013C 3207 nt1.99□□□□□ -2.09
VPS55P47111 CAF120YNL278W 3183 nt1.99□□□□□ -2.09
VPS55P47111 PHO5YBR093C 1404 nt1.99□□□□□ -2.09
VPS55P47111 MDV1YJL112W 2145 nt1.99□□□□□ -2.09
VPS55P47111 DUF1YOL087C 3351 nt1.98□□□□□ -2.09
VPS55P47111 PDR11YIL013C 4236 nt1.98□□□□□ -2.09
VPS55P47111 SFH5YJL145W 885 nt1.98□□□□□ -2.09
VPS55P47111 DID4YKL002W 699 nt1.98□□□□□ -2.09
VPS55P47111 ATP11YNL315C 957 nt1.98□□□□□ -2.09
VPS55P47111 YOR050CYOR050C 348 nt1.98□□□□□ -2.09
VPS55P47111 TUM1YOR251C 915 nt1.98□□□□□ -2.09
VPS55P47111 RPL36BYPL249C-A 303 nt1.98□□□□□ -2.09
VPS55P47111 TOR1YJR066W 7413 nt1.98□□□□□ -2.09
VPS55P47111 MLH1YMR167W 2310 nt1.97□□□□□ -2.09
VPS55P47111 CUS1YMR240C 1311 nt1.97□□□□□ -2.09
VPS55P47111 INO2YDR123C 915 nt1.97□□□□□ -2.09
VPS55P47111 RPL24BYGR148C 468 nt1.97□□□□□ -2.09
VPS55P47111 SOL3YHR163W 750 nt1.97□□□□□ -2.09
VPS55P47111 YIL086CYIL086C 309 nt1.97□□□□□ -2.09
VPS55P47111 FMC1YIL098C 468 nt1.97□□□□□ -2.09
VPS55P47111 SWP1YMR149W 861 nt1.97□□□□□ -2.09
VPS55P47111 TAF14YPL129W 735 nt1.97□□□□□ -2.09
VPS55P47111 YPR015CYPR015C 744 nt1.97□□□□□ -2.09
VPS55P47111 HPA2YPR193C 471 nt1.97□□□□□ -2.09
VPS55P47111 ESL2YKR096W 3588 nt1.97□□□□□ -2.09
VPS55P47111 NDC80YIL144W 2076 nt1.96□□□□□ -2.1
VPS55P47111 YDR249CYDR249C 1122 nt1.96□□□□□ -2.1
VPS55P47111 WBP1YEL002C 1293 nt1.96□□□□□ -2.1
VPS55P47111 YAP5YIR018W 738 nt1.96□□□□□ -2.1
VPS55P47111 SWD2YKL018W 990 nt1.96□□□□□ -2.1
VPS55P47111 ATG17YLR423C 1254 nt1.96□□□□□ -2.1
VPS55P47111 GCD10YNL062C 1437 nt1.96□□□□□ -2.1
VPS55P47111 YDR186CYDR186C 2634 nt1.96□□□□□ -2.1
VPS55P47111 UTP15YMR093W 1542 nt1.96□□□□□ -2.1
VPS55P47111 YGL176CYGL176C 1665 nt1.96□□□□□ -2.1
VPS55P47111 ATP25YMR098C 1839 nt1.96□□□□□ -2.1
VPS55P47111 VPS41YDR080W 2979 nt1.95□□□□□ -2.1
VPS55P47111 FIN1YDR130C 876 nt1.95□□□□□ -2.1
VPS55P47111 YGR293CYGR293C 462 nt1.95□□□□□ -2.1
VPS55P47111 RSM19YNR037C 276 nt1.95□□□□□ -2.1
VPS55P47111 NDJ1YOL104C 1059 nt1.95□□□□□ -2.1
VPS55P47111 ATP3YBR039W 936 nt1.95□□□□□ -2.1
VPS55P47111 YBR298C-AYBR298C-A 222 nt1.95□□□□□ -2.1
VPS55P47111 VBA4YDR119W 2307 nt1.95□□□□□ -2.1
VPS55P47111 MRD1YPR112C 2664 nt1.94□□□□□ -2.1
VPS55P47111 SPB4YFL002C 1821 nt1.94□□□□□ -2.1
VPS55P47111 RIM13YMR154C 2184 nt1.94□□□□□ -2.1
VPS55P47111 YLR257WYLR257W 966 nt1.94□□□□□ -2.1
VPS55P47111 YMR187CYMR187C 1296 nt1.94□□□□□ -2.1
VPS55P47111 POS5YPL188W 1245 nt1.94□□□□□ -2.1
VPS55P47111 ACM1YPL267W 630 nt1.94□□□□□ -2.1
VPS55P47111 FES1YBR101C 873 nt1.94□□□□□ -2.1
VPS55P47111 CUE3YGL110C 1875 nt1.94□□□□□ -2.1
VPS55P47111 YEF3YLR249W 3135 nt1.94□□□□□ -2.1
VPS55P47111 NPL4YBR170C 1743 nt1.94□□□□□ -2.1
VPS55P47111 DXO1YDR370C 1329 nt1.93□□□□□ -2.1
VPS55P47111 PSD2YGR170W 3417 nt1.93□□□□□ -2.1
VPS55P47111 OAF3YKR064W 2592 nt1.93□□□□□ -2.1
VPS55P47111 GPP2YER062C 753 nt1.93□□□□□ -2.1
VPS55P47111 CLC1YGR167W 702 nt1.93□□□□□ -2.1
VPS55P47111 YBR089WYBR089W 600 nt1.93□□□□□ -2.1
VPS55P47111 NET1YJL076W 3570 nt1.93□□□□□ -2.1
VPS55P47111 SGM1YJR134C 2124 nt1.93□□□□□ -2.1
VPS55P47111 UBP8YMR223W 1416 nt1.92□□□□□ -2.1
VPS55P47111 YIL054WYIL054W 318 nt1.92□□□□□ -2.1
VPS55P47111 YKR070WYKR070W 1059 nt1.92□□□□□ -2.1
VPS55P47111 REC102YLR329W 795 nt1.92□□□□□ -2.1
VPS55P47111 YBL029WYBL029W 1131 nt1.92□□□□□ -2.1
VPS55P47111 YOR055WYOR055W 435 nt1.92□□□□□ -2.1
VPS55P47111 KAR4YCL055W 1008 nt1.92□□□□□ -2.1
VPS55P47111 RPN3YER021W 1572 nt1.92□□□□□ -2.1
VPS55P47111 ARP8YOR141C 2646 nt1.92□□□□□ -2.1
VPS55P47111 YGR237CYGR237C 2358 nt1.92□□□□□ -2.1
VPS55P47111 APM1YPL259C 1428 nt1.91□□□□□ -2.1
VPS55P47111 YPK1YKL126W 2043 nt1.91□□□□□ -2.1
VPS55P47111 TMA64YDR117C 1698 nt1.91□□□□□ -2.1
VPS55P47111 ERP3YDL018C 678 nt1.91□□□□□ -2.1
VPS55P47111 PDS1YDR113C 1122 nt1.91□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms