Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 tQ(UUG)CtQ(UUG)C 72 nt4.15□□□□□ -1.75
TDP1P38319 tQ(UUG)D1tQ(UUG)D1 72 nt4.15□□□□□ -1.75
TDP1P38319 tQ(UUG)D2tQ(UUG)D2 72 nt4.15□□□□□ -1.75
TDP1P38319 tQ(UUG)D3tQ(UUG)D3 72 nt4.15□□□□□ -1.75
TDP1P38319 tQ(UUG)E1tQ(UUG)E1 72 nt4.15□□□□□ -1.75
TDP1P38319 tQ(UUG)HtQ(UUG)H 72 nt4.15□□□□□ -1.75
TDP1P38319 tQ(UUG)LtQ(UUG)L 72 nt4.15□□□□□ -1.75
TDP1P38319 YIL171WYIL171W 330 nt4.15□□□□□ -1.75
TDP1P38319 ATG27YJL178C 816 nt4.15□□□□□ -1.75
TDP1P38319 BNA1YJR025C 534 nt4.15□□□□□ -1.75
TDP1P38319 ACP1YKL192C 378 nt4.15□□□□□ -1.75
TDP1P38319 MRPL44YMR225C 297 nt4.15□□□□□ -1.75
TDP1P38319 ATX2YOR079C 942 nt4.15□□□□□ -1.75
TDP1P38319 RPS11BYBR048W 471 nt4.15□□□□□ -1.75
TDP1P38319 RPB5YBR154C 648 nt4.15□□□□□ -1.75
TDP1P38319 DSE1YER124C 1722 nt4.15□□□□□ -1.75
TDP1P38319 NTA1YJR062C 1374 nt4.14□□□□□ -1.75
TDP1P38319 TRM12YML005W 1389 nt4.14□□□□□ -1.75
TDP1P38319 PTA1YAL043C 2358 nt4.14□□□□□ -1.75
TDP1P38319 SIP1YDR422C 2448 nt4.14□□□□□ -1.75
TDP1P38319 SST2YLR452C 2097 nt4.14□□□□□ -1.75
TDP1P38319 MGT1YDL200C 567 nt4.14□□□□□ -1.75
TDP1P38319 ECM11YDR446W 909 nt4.14□□□□□ -1.75
TDP1P38319 AGA2YGL032C 264 nt4.14□□□□□ -1.75
TDP1P38319 ILM1YJR118C 612 nt4.14□□□□□ -1.75
TDP1P38319 OAR1YKL055C 837 nt4.14□□□□□ -1.75
TDP1P38319 MRPL3YMR024W 1173 nt4.14□□□□□ -1.75
TDP1P38319 MOH1YBL049W 417 nt4.14□□□□□ -1.75
TDP1P38319 YNL035CYNL035C 1170 nt4.14□□□□□ -1.75
TDP1P38319 YNR071CYNR071C 1029 nt4.14□□□□□ -1.75
TDP1P38319 ECM23YPL021W 564 nt4.14□□□□□ -1.75
TDP1P38319 ARL1YBR164C 552 nt4.14□□□□□ -1.75
TDP1P38319 DSS1YMR287C 2910 nt4.14□□□□□ -1.75
TDP1P38319 VHS3YOR054C 2025 nt4.14□□□□□ -1.75
TDP1P38319 PIM1YBL022C 3402 nt4.14□□□□□ -1.75
TDP1P38319 CST9YLR394W 1449 nt4.13□□□□□ -1.75
TDP1P38319 SAF1YBR280C 1914 nt4.13□□□□□ -1.75
TDP1P38319 FLO8YER109C 2400 nt4.13□□□□□ -1.75
TDP1P38319 LAS1YKR063C 1509 nt4.13□□□□□ -1.75
TDP1P38319 ELO2YCR034W 1044 nt4.13□□□□□ -1.75
TDP1P38319 RXT3YDL076C 885 nt4.13□□□□□ -1.75
TDP1P38319 YDR535CYDR535C 501 nt4.13□□□□□ -1.75
TDP1P38319 UBC8YEL012W 657 nt4.13□□□□□ -1.75
TDP1P38319 SLX8YER116C 825 nt4.13□□□□□ -1.75
TDP1P38319 YHR213WYHR213W 597 nt4.13□□□□□ -1.75
TDP1P38319 REE1YJL217W 597 nt4.13□□□□□ -1.75
TDP1P38319 EAF6YJR082C 342 nt4.13□□□□□ -1.75
TDP1P38319 YAR062WYAR062W 597 nt4.13□□□□□ -1.75
TDP1P38319 YOR029WYOR029W 336 nt4.13□□□□□ -1.75
TDP1P38319 DCS2YOR173W 1062 nt4.13□□□□□ -1.75
TDP1P38319 LEE1YPL054W 906 nt4.13□□□□□ -1.75
TDP1P38319 YER077CYER077C 2067 nt4.13□□□□□ -1.75
TDP1P38319 ASM4YDL088C 1587 nt4.13□□□□□ -1.75
TDP1P38319 SLF1YDR515W 1344 nt4.13□□□□□ -1.75
TDP1P38319 GIP4YAL031C 2283 nt4.12□□□□□ -1.75
TDP1P38319 SPO73YER046W 432 nt4.12□□□□□ -1.75
TDP1P38319 RPL8AYHL033C 771 nt4.12□□□□□ -1.75
TDP1P38319 YIL156W-AYIL156W-A 402 nt4.12□□□□□ -1.75
TDP1P38319 YAL034C-BYAL034C-B 354 nt4.12□□□□□ -1.75
TDP1P38319 SUI1YNL244C 327 nt4.12□□□□□ -1.75
TDP1P38319 MPD2YOL088C 834 nt4.12□□□□□ -1.75
TDP1P38319 YOR387CYOR387C 621 nt4.12□□□□□ -1.75
TDP1P38319 HPA2YPR193C 471 nt4.12□□□□□ -1.75
TDP1P38319 GAL11YOL051W 3246 nt4.12□□□□□ -1.75
TDP1P38319 CEX1YOR112W 2286 nt4.12□□□□□ -1.75
TDP1P38319 HCA4YJL033W 2313 nt4.12□□□□□ -1.75
TDP1P38319 NAM2YLR382C 2685 nt4.12□□□□□ -1.75
TDP1P38319 RRN7YJL025W 1545 nt4.11□□□□□ -1.75
TDP1P38319 MET12YPL023C 1974 nt4.11□□□□□ -1.75
TDP1P38319 YIL115W-AYIL115W-A 372 nt4.11□□□□□ -1.75
TDP1P38319 YIL161WYIL161W 708 nt4.11□□□□□ -1.75
TDP1P38319 YJL133C-AYJL133C-A 225 nt4.11□□□□□ -1.75
TDP1P38319 RPC37YKR025W 849 nt4.11□□□□□ -1.75
TDP1P38319 YLR400WYLR400W 474 nt4.11□□□□□ -1.75
TDP1P38319 YMR001C-AYMR001C-A 231 nt4.11□□□□□ -1.75
TDP1P38319 TPM1YNL079C 600 nt4.11□□□□□ -1.75
TDP1P38319 YBR012CYBR012C 420 nt4.11□□□□□ -1.75
TDP1P38319 YCF1YDR135C 4548 nt4.1□□□□□ -1.75
TDP1P38319 TAF7YMR227C 1773 nt4.1□□□□□ -1.75
TDP1P38319 YDR199WYDR199W 366 nt4.1□□□□□ -1.75
TDP1P38319 ATP5YDR298C 639 nt4.1□□□□□ -1.75
TDP1P38319 IZH1YDR492W 951 nt4.1□□□□□ -1.75
TDP1P38319 MIG2YGL209W 1149 nt4.1□□□□□ -1.75
TDP1P38319 AHP1YLR109W 531 nt4.1□□□□□ -1.75
TDP1P38319 FOL3YMR113W 1284 nt4.1□□□□□ -1.75
TDP1P38319 RHO5YNL180C 996 nt4.1□□□□□ -1.75
TDP1P38319 OM14YBR230C 405 nt4.1□□□□□ -1.75
TDP1P38319 MET17YLR303W 1335 nt4.1□□□□□ -1.75
TDP1P38319 SSH1YBR283C 1473 nt4.1□□□□□ -1.75
TDP1P38319 DSL1YNL258C 2265 nt4.09□□□□□ -1.75
TDP1P38319 YDL032WYDL032W 312 nt4.09□□□□□ -1.75
TDP1P38319 DAD1YDR016C 285 nt4.09□□□□□ -1.75
TDP1P38319 MSW1YDR268W 1140 nt4.09□□□□□ -1.75
TDP1P38319 MIG3YER028C 1185 nt4.09□□□□□ -1.75
TDP1P38319 YPT35YHR105W 645 nt4.09□□□□□ -1.75
TDP1P38319 YIL068W-AYIL068W-A 384 nt4.09□□□□□ -1.75
TDP1P38319 PEP8YJL053W 1140 nt4.09□□□□□ -1.75
TDP1P38319 YJR128WYJR128W 360 nt4.09□□□□□ -1.75
TDP1P38319 YKL063CYKL063C 504 nt4.09□□□□□ -1.75
TDP1P38319 RDN5-1RDN5-1 121 nt4.09□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 26.1 ms