Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SFTPDP35247 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SFTPDP35247 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SFTPDP35247 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPDP35247 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPDP35247 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPDP35247 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPDP35247 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.25■□□□□ 0.67
SFTPDP35247 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPDP35247 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SFTPDP35247 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPDP35247 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SFTPDP35247 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.25■□□□□ 0.67
SFTPDP35247 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.25■□□□□ 0.67
SFTPDP35247 TERF1P2-201ENST00000583350 1212 ntBASIC19.25■□□□□ 0.67
SFTPDP35247 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SFTPDP35247 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.25■□□□□ 0.67
SFTPDP35247 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPDP35247 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPDP35247 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SFTPDP35247 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SFTPDP35247 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SFTPDP35247 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPDP35247 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPDP35247 AC055733.4-201ENST00000638462 1354 ntBASIC19.24■□□□□ 0.67
SFTPDP35247 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.24■□□□□ 0.67
SFTPDP35247 AC079140.4-201ENST00000507448 529 ntBASIC19.24■□□□□ 0.67
SFTPDP35247 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.24■□□□□ 0.67
SFTPDP35247 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.24■□□□□ 0.67
SFTPDP35247 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.24■□□□□ 0.67
SFTPDP35247 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SFTPDP35247 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPDP35247 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SFTPDP35247 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPDP35247 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPDP35247 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPDP35247 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.23■□□□□ 0.67
SFTPDP35247 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SFTPDP35247 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPDP35247 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.23■□□□□ 0.67
SFTPDP35247 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPDP35247 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPDP35247 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SFTPDP35247 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.23■□□□□ 0.67
SFTPDP35247 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.23■□□□□ 0.67
SFTPDP35247 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.23■□□□□ 0.67
SFTPDP35247 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPDP35247 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SFTPDP35247 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.22■□□□□ 0.67
SFTPDP35247 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.22■□□□□ 0.67
SFTPDP35247 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
SFTPDP35247 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.22■□□□□ 0.67
SFTPDP35247 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SFTPDP35247 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SFTPDP35247 AC034268.1-201ENST00000441047 882 ntBASIC19.22■□□□□ 0.67
SFTPDP35247 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 DUX4L2-201ENST00000561772 1275 ntBASIC19.22■□□□□ 0.67
SFTPDP35247 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.22■□□□□ 0.67
SFTPDP35247 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 MIR5787-201ENST00000611784 55 ntBASIC19.22■□□□□ 0.67
SFTPDP35247 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
SFTPDP35247 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.22■□□□□ 0.67
SFTPDP35247 DUX4L6-201ENST00000626483 1275 ntBASIC19.22■□□□□ 0.67
SFTPDP35247 DUX4L1-201ENST00000627662 1275 ntBASIC19.22■□□□□ 0.67
SFTPDP35247 DUX4L8-201ENST00000629013 1275 ntBASIC19.22■□□□□ 0.67
SFTPDP35247 DUX4L3-201ENST00000630187 1275 ntBASIC19.22■□□□□ 0.67
SFTPDP35247 DUX4L7-201ENST00000630678 1275 ntBASIC19.22■□□□□ 0.67
SFTPDP35247 DUX4L5-201ENST00000630834 1275 ntBASIC19.22■□□□□ 0.67
SFTPDP35247 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SFTPDP35247 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SFTPDP35247 AC010542.4-201ENST00000563151 1910 ntBASIC19.21■□□□□ 0.67
SFTPDP35247 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPDP35247 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SFTPDP35247 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.21■□□□□ 0.67
SFTPDP35247 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.21■□□□□ 0.67
SFTPDP35247 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPDP35247 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPDP35247 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.21■□□□□ 0.67
SFTPDP35247 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.21■□□□□ 0.67
SFTPDP35247 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.21■□□□□ 0.67
SFTPDP35247 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.21■□□□□ 0.67
SFTPDP35247 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
SFTPDP35247 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPDP35247 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SFTPDP35247 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SFTPDP35247 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SFTPDP35247 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SFTPDP35247 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
SFTPDP35247 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTPDP35247 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms