Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC6A4P31645 AC053503.5-201ENST00000601508 636 ntBASIC21.92■■□□□ 1.1
SLC6A4P31645 RARRES2P11-201ENST00000635158 484 ntBASIC21.92■■□□□ 1.1
SLC6A4P31645 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC6A4P31645 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC6A4P31645 AC010542.4-201ENST00000563151 1910 ntBASIC21.92■■□□□ 1.1
SLC6A4P31645 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC6A4P31645 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC6A4P31645 ECEL1P1-201ENST00000373592 1742 ntBASIC21.92■■□□□ 1.1
SLC6A4P31645 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SLC6A4P31645 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A4P31645 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.91■■□□□ 1.1
SLC6A4P31645 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A4P31645 AC012676.1-201ENST00000574705 1949 ntBASIC21.91■■□□□ 1.1
SLC6A4P31645 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A4P31645 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.91■■□□□ 1.1
SLC6A4P31645 AC010141.2-201ENST00000452426 721 ntBASIC21.91■■□□□ 1.1
SLC6A4P31645 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A4P31645 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.91■■□□□ 1.1
SLC6A4P31645 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SLC6A4P31645 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A4P31645 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A4P31645 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A4P31645 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A4P31645 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A4P31645 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SLC6A4P31645 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A4P31645 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A4P31645 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A4P31645 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC6A4P31645 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC6A4P31645 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC6A4P31645 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A4P31645 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
SLC6A4P31645 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC6A4P31645 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A4P31645 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SLC6A4P31645 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC6A4P31645 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC6A4P31645 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.89■■□□□ 1.1
SLC6A4P31645 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC6A4P31645 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC6A4P31645 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SLC6A4P31645 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A4P31645 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A4P31645 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.89■■□□□ 1.09
SLC6A4P31645 UBE2DNL-204ENST00000602536 740 ntBASIC21.89■■□□□ 1.09
SLC6A4P31645 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A4P31645 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A4P31645 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A4P31645 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC6A4P31645 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A4P31645 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A4P31645 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A4P31645 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A4P31645 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A4P31645 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A4P31645 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A4P31645 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.88■■□□□ 1.09
SLC6A4P31645 AC090192.1-201ENST00000517740 490 ntBASIC21.88■■□□□ 1.09
SLC6A4P31645 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A4P31645 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.88■■□□□ 1.09
SLC6A4P31645 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.88■■□□□ 1.09
SLC6A4P31645 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC6A4P31645 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.87■■□□□ 1.09
SLC6A4P31645 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SLC6A4P31645 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.87■■□□□ 1.09
SLC6A4P31645 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC6A4P31645 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC6A4P31645 AC080038.1-201ENST00000611274 1154 ntBASIC21.87■■□□□ 1.09
SLC6A4P31645 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A4P31645 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC6A4P31645 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.86■■□□□ 1.09
SLC6A4P31645 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.86■■□□□ 1.09
SLC6A4P31645 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A4P31645 AC011767.1-201ENST00000617410 1153 ntBASIC21.86■■□□□ 1.09
SLC6A4P31645 BID-214ENST00000617586 542 ntTSL 5 BASIC21.86■■□□□ 1.09
SLC6A4P31645 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms