Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CPS1P31327 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CPS1P31327 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CPS1P31327 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CPS1P31327 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CPS1P31327 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC30.48■■■□□ 2.47
CPS1P31327 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC30.48■■■□□ 2.47
CPS1P31327 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC30.48■■■□□ 2.47
CPS1P31327 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CPS1P31327 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
CPS1P31327 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC30.47■■■□□ 2.47
CPS1P31327 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC30.47■■■□□ 2.47
CPS1P31327 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC30.47■■■□□ 2.47
CPS1P31327 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC30.47■■■□□ 2.47
CPS1P31327 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC30.47■■■□□ 2.47
CPS1P31327 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CPS1P31327 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CPS1P31327 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
CPS1P31327 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CPS1P31327 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CPS1P31327 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC30.47■■■□□ 2.47
CPS1P31327 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.47■■■□□ 2.47
CPS1P31327 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.47■■■□□ 2.47
CPS1P31327 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC30.47■■■□□ 2.47
CPS1P31327 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CPS1P31327 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC30.46■■■□□ 2.47
CPS1P31327 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
CPS1P31327 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC30.46■■■□□ 2.47
CPS1P31327 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CPS1P31327 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC30.46■■■□□ 2.47
CPS1P31327 RPPH1-201ENST00000516869 333 ntBASIC30.46■■■□□ 2.47
CPS1P31327 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC30.46■■■□□ 2.47
CPS1P31327 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.46■■■□□ 2.47
CPS1P31327 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CPS1P31327 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
CPS1P31327 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CPS1P31327 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CPS1P31327 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC30.45■■■□□ 2.47
CPS1P31327 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CPS1P31327 Z99916.2-201ENST00000604037 246 ntBASIC30.45■■■□□ 2.47
CPS1P31327 DUSP8P5-201ENST00000422884 1815 ntBASIC30.45■■■□□ 2.46
CPS1P31327 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.45■■■□□ 2.46
CPS1P31327 AC010980.2-201ENST00000587099 1412 ntBASIC30.45■■■□□ 2.46
CPS1P31327 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CPS1P31327 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC30.44■■■□□ 2.46
CPS1P31327 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC30.44■■■□□ 2.46
CPS1P31327 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CPS1P31327 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC30.44■■■□□ 2.46
CPS1P31327 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
CPS1P31327 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC30.44■■■□□ 2.46
CPS1P31327 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CPS1P31327 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC30.44■■■□□ 2.46
CPS1P31327 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CPS1P31327 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CPS1P31327 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CPS1P31327 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CPS1P31327 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CPS1P31327 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CPS1P31327 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CPS1P31327 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC30.43■■■□□ 2.46
CPS1P31327 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CPS1P31327 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
CPS1P31327 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
CPS1P31327 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CPS1P31327 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CPS1P31327 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
CPS1P31327 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CPS1P31327 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CPS1P31327 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CPS1P31327 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.42■■■□□ 2.46
CPS1P31327 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
CPS1P31327 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC30.42■■■□□ 2.46
CPS1P31327 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
CPS1P31327 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CPS1P31327 MDFI-202ENST00000373050 809 ntTSL 2 BASIC30.42■■■□□ 2.46
CPS1P31327 SERPINH1P1-201ENST00000419794 1249 ntBASIC30.42■■■□□ 2.46
CPS1P31327 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.42■■■□□ 2.46
CPS1P31327 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC30.42■■■□□ 2.46
CPS1P31327 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC30.42■■■□□ 2.46
CPS1P31327 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CPS1P31327 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CPS1P31327 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC30.41■■■□□ 2.46
CPS1P31327 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CPS1P31327 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC30.41■■■□□ 2.46
CPS1P31327 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC30.41■■■□□ 2.46
CPS1P31327 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CPS1P31327 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
CPS1P31327 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CPS1P31327 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.41■■■□□ 2.46
CPS1P31327 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
CPS1P31327 NAA20-201ENST00000310450 920 ntTSL 2 BASIC30.4■■■□□ 2.46
CPS1P31327 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
CPS1P31327 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC30.4■■■□□ 2.46
CPS1P31327 C1QBPP2-201ENST00000528754 825 ntBASIC30.4■■■□□ 2.46
CPS1P31327 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC30.4■■■□□ 2.46
CPS1P31327 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC30.4■■■□□ 2.46
CPS1P31327 AL162412.1-201ENST00000567129 965 ntBASIC30.4■■■□□ 2.46
CPS1P31327 CYP2T3P-201ENST00000601990 817 ntBASIC30.4■■■□□ 2.46
CPS1P31327 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC30.4■■■□□ 2.46
CPS1P31327 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms