Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
GDF1P27539 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GDF1P27539 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDF1P27539 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDF1P27539 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDF1P27539 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
GDF1P27539 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDF1P27539 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GDF1P27539 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.31■□□□□ 0.68
GDF1P27539 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDF1P27539 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDF1P27539 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.31■□□□□ 0.68
GDF1P27539 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.31■□□□□ 0.68
GDF1P27539 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDF1P27539 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDF1P27539 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.31■□□□□ 0.68
GDF1P27539 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.31■□□□□ 0.68
GDF1P27539 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.31■□□□□ 0.68
GDF1P27539 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GDF1P27539 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDF1P27539 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
GDF1P27539 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDF1P27539 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
GDF1P27539 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDF1P27539 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDF1P27539 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDF1P27539 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.3■□□□□ 0.68
GDF1P27539 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.3■□□□□ 0.68
GDF1P27539 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.3■□□□□ 0.68
GDF1P27539 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GDF1P27539 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDF1P27539 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GDF1P27539 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDF1P27539 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.3■□□□□ 0.68
GDF1P27539 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.29■□□□□ 0.68
GDF1P27539 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 AC080038.1-201ENST00000611274 1154 ntBASIC19.29■□□□□ 0.68
GDF1P27539 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.29■□□□□ 0.68
GDF1P27539 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDF1P27539 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GDF1P27539 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.28■□□□□ 0.68
GDF1P27539 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDF1P27539 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GDF1P27539 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDF1P27539 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDF1P27539 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDF1P27539 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GDF1P27539 AC010141.2-201ENST00000452426 721 ntBASIC19.28■□□□□ 0.68
GDF1P27539 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
GDF1P27539 AC138907.5-202ENST00000569484 235 ntBASIC19.28■□□□□ 0.68
GDF1P27539 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.28■□□□□ 0.68
GDF1P27539 UBE2DNL-204ENST00000602536 740 ntBASIC19.28■□□□□ 0.68
GDF1P27539 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.28■□□□□ 0.68
GDF1P27539 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.28■□□□□ 0.68
GDF1P27539 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.28■□□□□ 0.68
GDF1P27539 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDF1P27539 AC233723.2-201ENST00000623798 2106 ntBASIC19.28■□□□□ 0.68
GDF1P27539 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDF1P27539 AC068473.5-201ENST00000616428 2072 ntBASIC19.28■□□□□ 0.68
GDF1P27539 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GDF1P27539 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GDF1P27539 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GDF1P27539 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GDF1P27539 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.27■□□□□ 0.68
GDF1P27539 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.27■□□□□ 0.68
GDF1P27539 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GDF1P27539 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GDF1P27539 EEF1DP3-203ENST00000566025 782 ntBASIC19.27■□□□□ 0.68
GDF1P27539 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.27■□□□□ 0.68
GDF1P27539 AC053503.5-201ENST00000601508 636 ntBASIC19.27■□□□□ 0.68
GDF1P27539 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.27■□□□□ 0.68
GDF1P27539 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GDF1P27539 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.27■□□□□ 0.67
GDF1P27539 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GDF1P27539 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GDF1P27539 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
GDF1P27539 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GDF1P27539 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GDF1P27539 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.26■□□□□ 0.67
GDF1P27539 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GDF1P27539 AC011767.1-201ENST00000617410 1153 ntBASIC19.26■□□□□ 0.67
GDF1P27539 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GDF1P27539 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.26■□□□□ 0.67
GDF1P27539 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.25■□□□□ 0.67
GDF1P27539 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDF1P27539 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDF1P27539 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms