Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APCP25054 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APCP25054 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APCP25054 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
APCP25054 C2orf69P4-201ENST00000565394 541 ntBASIC18.18■□□□□ 0.5
APCP25054 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APCP25054 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
APCP25054 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.18■□□□□ 0.5
APCP25054 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APCP25054 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APCP25054 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APCP25054 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.17■□□□□ 0.5
APCP25054 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.17■□□□□ 0.5
APCP25054 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.17■□□□□ 0.5
APCP25054 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APCP25054 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APCP25054 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APCP25054 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
APCP25054 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.17■□□□□ 0.5
APCP25054 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.17■□□□□ 0.5
APCP25054 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.17■□□□□ 0.5
APCP25054 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APCP25054 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.16■□□□□ 0.5
APCP25054 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.16■□□□□ 0.5
APCP25054 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.16■□□□□ 0.5
APCP25054 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.16■□□□□ 0.5
APCP25054 KRT18P35-201ENST00000510488 1269 ntBASIC18.16■□□□□ 0.5
APCP25054 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.16■□□□□ 0.5
APCP25054 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APCP25054 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APCP25054 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APCP25054 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
APCP25054 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APCP25054 RBM17P2-201ENST00000616397 1405 ntBASIC18.16■□□□□ 0.5
APCP25054 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
APCP25054 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APCP25054 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
APCP25054 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APCP25054 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
APCP25054 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.15■□□□□ 0.5
APCP25054 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 PNMA6B-201ENST00000538162 1200 ntBASIC18.15■□□□□ 0.5
APCP25054 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.15■□□□□ 0.5
APCP25054 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
APCP25054 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
APCP25054 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
APCP25054 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APCP25054 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.14■□□□□ 0.5
APCP25054 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
APCP25054 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.14■□□□□ 0.5
APCP25054 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
APCP25054 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
APCP25054 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
APCP25054 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APCP25054 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APCP25054 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APCP25054 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.14■□□□□ 0.49
APCP25054 RPS2P55-201ENST00000397318 883 ntBASIC18.14■□□□□ 0.49
APCP25054 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APCP25054 AC107956.1-201ENST00000494359 873 ntBASIC18.14■□□□□ 0.49
APCP25054 AC233702.5-201ENST00000584107 538 ntBASIC18.14■□□□□ 0.49
APCP25054 AC060766.5-201ENST00000590539 871 ntBASIC18.14■□□□□ 0.49
APCP25054 AL049637.2-201ENST00000641778 930 ntBASIC18.14■□□□□ 0.49
APCP25054 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APCP25054 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
APCP25054 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.14■□□□□ 0.49
APCP25054 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APCP25054 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APCP25054 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.14■□□□□ 0.49
APCP25054 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 RN7SL471P-201ENST00000580476 299 ntBASIC18.13■□□□□ 0.49
APCP25054 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.13■□□□□ 0.49
APCP25054 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 ARMC10P1-201ENST00000313754 855 ntBASIC18.13■□□□□ 0.49
APCP25054 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.13■□□□□ 0.49
APCP25054 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
APCP25054 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.13■□□□□ 0.49
APCP25054 SOX15-203ENST00000570788 1093 ntBASIC18.13■□□□□ 0.49
APCP25054 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
APCP25054 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
APCP25054 AL591742.1-201ENST00000604433 565 ntBASIC18.13■□□□□ 0.49
APCP25054 AC069544.1-201ENST00000609399 999 ntBASIC18.13■□□□□ 0.49
APCP25054 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms