Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
KCNA3P22001 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA3P22001 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.43■■□□□ 1.82
KCNA3P22001 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA3P22001 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.42■■□□□ 1.82
KCNA3P22001 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNA3P22001 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNA3P22001 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.42■■□□□ 1.82
KCNA3P22001 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.42■■□□□ 1.82
KCNA3P22001 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNA3P22001 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.42■■□□□ 1.82
KCNA3P22001 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNA3P22001 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.42■■□□□ 1.82
KCNA3P22001 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
KCNA3P22001 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.42■■□□□ 1.82
KCNA3P22001 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.42■■□□□ 1.82
KCNA3P22001 REXO1L12P-201ENST00000622156 912 ntBASIC26.42■■□□□ 1.82
KCNA3P22001 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.42■■□□□ 1.82
KCNA3P22001 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNA3P22001 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNA3P22001 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNA3P22001 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.42■■□□□ 1.82
KCNA3P22001 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.41■■□□□ 1.82
KCNA3P22001 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KCNA3P22001 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KCNA3P22001 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
KCNA3P22001 RPPH1-201ENST00000516869 333 ntBASIC26.41■■□□□ 1.82
KCNA3P22001 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.41■■□□□ 1.82
KCNA3P22001 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KCNA3P22001 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
KCNA3P22001 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.41■■□□□ 1.82
KCNA3P22001 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.41■■□□□ 1.82
KCNA3P22001 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
KCNA3P22001 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
KCNA3P22001 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
KCNA3P22001 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
KCNA3P22001 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.4■■□□□ 1.82
KCNA3P22001 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.4■■□□□ 1.82
KCNA3P22001 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
KCNA3P22001 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNA3P22001 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNA3P22001 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.39■■□□□ 1.82
KCNA3P22001 MIR718-201ENST00000390190 70 ntBASIC26.39■■□□□ 1.82
KCNA3P22001 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
KCNA3P22001 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.39■■□□□ 1.82
KCNA3P22001 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
KCNA3P22001 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
KCNA3P22001 AP006587.3-201ENST00000525742 1516 ntBASIC26.39■■□□□ 1.81
KCNA3P22001 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA3P22001 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA3P22001 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA3P22001 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
KCNA3P22001 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA3P22001 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA3P22001 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.38■■□□□ 1.81
KCNA3P22001 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA3P22001 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.38■■□□□ 1.81
KCNA3P22001 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.38■■□□□ 1.81
KCNA3P22001 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA3P22001 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.38■■□□□ 1.81
KCNA3P22001 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA3P22001 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.38■■□□□ 1.81
KCNA3P22001 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
KCNA3P22001 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA3P22001 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
KCNA3P22001 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.37■■□□□ 1.81
KCNA3P22001 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.37■■□□□ 1.81
KCNA3P22001 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.37■■□□□ 1.81
KCNA3P22001 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.37■■□□□ 1.81
KCNA3P22001 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.37■■□□□ 1.81
KCNA3P22001 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.37■■□□□ 1.81
KCNA3P22001 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.37■■□□□ 1.81
KCNA3P22001 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.37■■□□□ 1.81
KCNA3P22001 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
KCNA3P22001 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
KCNA3P22001 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA3P22001 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.36■■□□□ 1.81
KCNA3P22001 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.36■■□□□ 1.81
KCNA3P22001 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.36■■□□□ 1.81
KCNA3P22001 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.36■■□□□ 1.81
KCNA3P22001 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.36■■□□□ 1.81
KCNA3P22001 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
KCNA3P22001 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
KCNA3P22001 LINC00526-201ENST00000581067 1875 ntBASIC26.36■■□□□ 1.81
KCNA3P22001 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
KCNA3P22001 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KCNA3P22001 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms