Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1CP16403 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1CP16403 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1CP16403 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HIST1H1CP16403 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST1H1CP16403 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HIST1H1CP16403 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST1H1CP16403 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1CP16403 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.06■□□□□ 0.64
HIST1H1CP16403 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1CP16403 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1CP16403 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.06■□□□□ 0.64
HIST1H1CP16403 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1CP16403 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1CP16403 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST1H1CP16403 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H1CP16403 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H1CP16403 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.05■□□□□ 0.64
HIST1H1CP16403 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.05■□□□□ 0.64
HIST1H1CP16403 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HIST1H1CP16403 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H1CP16403 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H1CP16403 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST1H1CP16403 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
HIST1H1CP16403 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST1H1CP16403 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1CP16403 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.04■□□□□ 0.64
HIST1H1CP16403 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1CP16403 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1CP16403 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HIST1H1CP16403 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.04■□□□□ 0.64
HIST1H1CP16403 AL136116.3-201ENST00000402907 1138 ntBASIC19.04■□□□□ 0.64
HIST1H1CP16403 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1CP16403 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1CP16403 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST1H1CP16403 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.04■□□□□ 0.64
HIST1H1CP16403 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HIST1H1CP16403 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.04■□□□□ 0.64
HIST1H1CP16403 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HIST1H1CP16403 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.03■□□□□ 0.64
HIST1H1CP16403 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.03■□□□□ 0.64
HIST1H1CP16403 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.03■□□□□ 0.64
HIST1H1CP16403 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.03■□□□□ 0.64
HIST1H1CP16403 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST1H1CP16403 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.02■□□□□ 0.64
HIST1H1CP16403 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HIST1H1CP16403 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H1CP16403 AP006587.3-201ENST00000525742 1516 ntBASIC19.02■□□□□ 0.64
HIST1H1CP16403 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H1CP16403 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H1CP16403 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.02■□□□□ 0.64
HIST1H1CP16403 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HIST1H1CP16403 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H1CP16403 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.02■□□□□ 0.64
HIST1H1CP16403 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.02■□□□□ 0.64
HIST1H1CP16403 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H1CP16403 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HIST1H1CP16403 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.02■□□□□ 0.63
HIST1H1CP16403 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HIST1H1CP16403 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.01■□□□□ 0.63
HIST1H1CP16403 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H1CP16403 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H1CP16403 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HIST1H1CP16403 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.01■□□□□ 0.63
HIST1H1CP16403 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.01■□□□□ 0.63
HIST1H1CP16403 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HIST1H1CP16403 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HIST1H1CP16403 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H1CP16403 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
HIST1H1CP16403 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H1CP16403 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIST1H1CP16403 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.01■□□□□ 0.63
HIST1H1CP16403 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST1H1CP16403 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms