Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.3■■□□□ 1
TIMP2P16035 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.3■■□□□ 1
TIMP2P16035 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP2P16035 ECEL1P1-201ENST00000373592 1742 ntBASIC21.29■■□□□ 1
TIMP2P16035 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TIMP2P16035 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.29■■□□□ 1
TIMP2P16035 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.29■■□□□ 1
TIMP2P16035 AC080038.1-201ENST00000611274 1154 ntBASIC21.29■■□□□ 1
TIMP2P16035 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
TIMP2P16035 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TIMP2P16035 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP2P16035 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.28■■□□□ 1
TIMP2P16035 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.28■■□□□ 1
TIMP2P16035 AC010542.4-201ENST00000563151 1910 ntBASIC21.28■■□□□ 1
TIMP2P16035 AC012676.1-201ENST00000574705 1949 ntBASIC21.28■■□□□ 1
TIMP2P16035 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TIMP2P16035 KRT18P11-201ENST00000435214 1283 ntBASIC21.28■■□□□ 1
TIMP2P16035 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.28■■□□□ 1
TIMP2P16035 UBE2DNL-204ENST00000602536 740 ntBASIC21.28■■□□□ 1
TIMP2P16035 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.28■■□□□ 1
TIMP2P16035 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP2P16035 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.27■■□□□ 1
TIMP2P16035 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.27■■□□□ 1
TIMP2P16035 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP2P16035 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
TIMP2P16035 AC090192.1-201ENST00000517740 490 ntBASIC21.27■■□□□ 1
TIMP2P16035 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.27■■□□□ 1
TIMP2P16035 BID-214ENST00000617586 542 ntTSL 5 BASIC21.27■■□□□ 1
TIMP2P16035 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP2P16035 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP2P16035 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP2P16035 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.26■□□□□ 0.99
TIMP2P16035 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TIMP2P16035 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP2P16035 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP2P16035 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.26■□□□□ 0.99
TIMP2P16035 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.26■□□□□ 0.99
TIMP2P16035 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.26■□□□□ 0.99
TIMP2P16035 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.26■□□□□ 0.99
TIMP2P16035 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP2P16035 AC011767.1-201ENST00000617410 1153 ntBASIC21.26■□□□□ 0.99
TIMP2P16035 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.26■□□□□ 0.99
TIMP2P16035 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP2P16035 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP2P16035 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.26■□□□□ 0.99
TIMP2P16035 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TIMP2P16035 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TIMP2P16035 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.25■□□□□ 0.99
TIMP2P16035 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.25■□□□□ 0.99
TIMP2P16035 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.25■□□□□ 0.99
TIMP2P16035 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TIMP2P16035 KRT18P20-201ENST00000548986 1279 ntBASIC21.25■□□□□ 0.99
TIMP2P16035 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.25■□□□□ 0.99
TIMP2P16035 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.25■□□□□ 0.99
TIMP2P16035 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TIMP2P16035 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP2P16035 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.24■□□□□ 0.99
TIMP2P16035 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP2P16035 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TIMP2P16035 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP2P16035 CDCA4P2-201ENST00000441182 718 ntBASIC21.24■□□□□ 0.99
TIMP2P16035 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.24■□□□□ 0.99
TIMP2P16035 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms