Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
DEFA4P12838 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA4P12838 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.21■□□□□ 0.35
DEFA4P12838 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
DEFA4P12838 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
DEFA4P12838 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.2■□□□□ 0.34
DEFA4P12838 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA4P12838 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.2■□□□□ 0.34
DEFA4P12838 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
DEFA4P12838 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA4P12838 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.2■□□□□ 0.34
DEFA4P12838 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.2■□□□□ 0.34
DEFA4P12838 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
DEFA4P12838 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.2■□□□□ 0.34
DEFA4P12838 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.2■□□□□ 0.34
DEFA4P12838 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.2■□□□□ 0.34
DEFA4P12838 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.2■□□□□ 0.34
DEFA4P12838 MIR3181-201ENST00000578512 73 ntBASIC17.2■□□□□ 0.34
DEFA4P12838 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.2■□□□□ 0.34
DEFA4P12838 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.2■□□□□ 0.34
DEFA4P12838 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA4P12838 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DEFA4P12838 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.2■□□□□ 0.34
DEFA4P12838 SYT6-210ENST00000641643 1587 ntBASIC17.19■□□□□ 0.34
DEFA4P12838 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.19■□□□□ 0.34
DEFA4P12838 AL157384.1-201ENST00000445995 2473 ntBASIC17.19■□□□□ 0.34
DEFA4P12838 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.19■□□□□ 0.34
DEFA4P12838 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 AL512631.2-201ENST00000604634 923 ntBASIC17.19■□□□□ 0.34
DEFA4P12838 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.19■□□□□ 0.34
DEFA4P12838 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DEFA4P12838 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
DEFA4P12838 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DEFA4P12838 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
DEFA4P12838 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DEFA4P12838 AF106564.1-201ENST00000607058 2553 ntBASIC17.18■□□□□ 0.34
DEFA4P12838 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.18■□□□□ 0.34
DEFA4P12838 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
DEFA4P12838 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
DEFA4P12838 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.18■□□□□ 0.34
DEFA4P12838 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.18■□□□□ 0.34
DEFA4P12838 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.18■□□□□ 0.34
DEFA4P12838 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
DEFA4P12838 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DEFA4P12838 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DEFA4P12838 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.18■□□□□ 0.34
DEFA4P12838 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.18■□□□□ 0.34
DEFA4P12838 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
DEFA4P12838 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DEFA4P12838 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DEFA4P12838 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DEFA4P12838 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DEFA4P12838 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DEFA4P12838 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DEFA4P12838 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
DEFA4P12838 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.17■□□□□ 0.34
DEFA4P12838 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.17■□□□□ 0.34
DEFA4P12838 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.17■□□□□ 0.34
DEFA4P12838 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DEFA4P12838 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
DEFA4P12838 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
DEFA4P12838 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DEFA4P12838 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DEFA4P12838 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.17■□□□□ 0.34
DEFA4P12838 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.17■□□□□ 0.34
DEFA4P12838 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DEFA4P12838 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.17■□□□□ 0.34
DEFA4P12838 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
DEFA4P12838 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
DEFA4P12838 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.16■□□□□ 0.34
DEFA4P12838 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DEFA4P12838 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms