Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SRFP11831 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.79■■□□□ 1.08
SRFP11831 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SRFP11831 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.79■■□□□ 1.08
SRFP11831 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.79■■□□□ 1.08
SRFP11831 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.79■■□□□ 1.08
SRFP11831 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 RBM17P2-201ENST00000616397 1405 ntBASIC21.79■■□□□ 1.08
SRFP11831 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRFP11831 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.78■■□□□ 1.08
SRFP11831 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SRFP11831 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFP11831 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRFP11831 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRFP11831 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
SRFP11831 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFP11831 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.78■■□□□ 1.08
SRFP11831 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRFP11831 AP003097.1-201ENST00000530657 1135 ntBASIC21.78■■□□□ 1.08
SRFP11831 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.78■■□□□ 1.08
SRFP11831 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRFP11831 AC073648.6-201ENST00000641589 218 ntBASIC21.78■■□□□ 1.08
SRFP11831 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFP11831 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.78■■□□□ 1.08
SRFP11831 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SRFP11831 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFP11831 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRFP11831 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SRFP11831 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRFP11831 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRFP11831 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRFP11831 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRFP11831 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRFP11831 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.77■■□□□ 1.08
SRFP11831 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.77■■□□□ 1.08
SRFP11831 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRFP11831 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.77■■□□□ 1.08
SRFP11831 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRFP11831 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.77■■□□□ 1.08
SRFP11831 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.77■■□□□ 1.08
SRFP11831 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRFP11831 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.77■■□□□ 1.08
SRFP11831 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRFP11831 KRT16P2-201ENST00000414673 1423 ntBASIC21.77■■□□□ 1.08
SRFP11831 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SRFP11831 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFP11831 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFP11831 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRFP11831 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRFP11831 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRFP11831 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.76■■□□□ 1.07
SRFP11831 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.76■■□□□ 1.07
SRFP11831 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.76■■□□□ 1.07
SRFP11831 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.76■■□□□ 1.07
SRFP11831 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.76■■□□□ 1.07
SRFP11831 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SRFP11831 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.76■■□□□ 1.07
SRFP11831 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SRFP11831 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRFP11831 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.76■■□□□ 1.07
SRFP11831 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.75■■□□□ 1.07
SRFP11831 AC092068.2-201ENST00000590491 1708 ntBASIC21.75■■□□□ 1.07
SRFP11831 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SRFP11831 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.75■■□□□ 1.07
SRFP11831 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRFP11831 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRFP11831 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SRFP11831 AC008550.1-201ENST00000511500 884 ntBASIC21.75■■□□□ 1.07
SRFP11831 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRFP11831 AC243732.1-201ENST00000612648 864 ntBASIC21.75■■□□□ 1.07
SRFP11831 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRFP11831 ANOS2P-203ENST00000472227 1816 ntBASIC21.75■■□□□ 1.07
SRFP11831 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRFP11831 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFP11831 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFP11831 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFP11831 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.74■■□□□ 1.07
SRFP11831 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.74■■□□□ 1.07
SRFP11831 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.74■■□□□ 1.07
SRFP11831 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.74■■□□□ 1.07
SRFP11831 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.74■■□□□ 1.07
SRFP11831 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.74■■□□□ 1.07
SRFP11831 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.74■■□□□ 1.07
SRFP11831 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SRFP11831 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFP11831 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFP11831 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRFP11831 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRFP11831 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRFP11831 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRFP11831 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.73■■□□□ 1.07
SRFP11831 LSM12P1-201ENST00000411836 588 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms