Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF728P0DKX0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 EDA-201ENST00000338901 1233 ntBASIC18.05■□□□□ 0.48
ZNF728P0DKX0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 AC010525.1-201ENST00000585559 441 ntBASIC18.05■□□□□ 0.48
ZNF728P0DKX0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF728P0DKX0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 BX842568.3-201ENST00000418104 571 ntBASIC18.04■□□□□ 0.48
ZNF728P0DKX0 SLC47A1P1-202ENST00000449666 945 ntBASIC18.04■□□□□ 0.48
ZNF728P0DKX0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 AC133561.4-201ENST00000566112 224 ntBASIC18.04■□□□□ 0.48
ZNF728P0DKX0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF728P0DKX0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.03■□□□□ 0.48
ZNF728P0DKX0 AL355001.2-201ENST00000620617 1191 ntBASIC18.03■□□□□ 0.48
ZNF728P0DKX0 AL031602.1-201ENST00000633169 911 ntBASIC18.03■□□□□ 0.48
ZNF728P0DKX0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF728P0DKX0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF728P0DKX0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ZNF728P0DKX0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ZNF728P0DKX0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF728P0DKX0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.02■□□□□ 0.48
ZNF728P0DKX0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF728P0DKX0 AC233992.3-201ENST00000607491 485 ntBASIC18.02■□□□□ 0.48
ZNF728P0DKX0 AC087239.1-201ENST00000622671 572 ntBASIC18.02■□□□□ 0.48
ZNF728P0DKX0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNF728P0DKX0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF728P0DKX0 AP005435.1-201ENST00000529293 1178 ntBASIC18.01■□□□□ 0.47
ZNF728P0DKX0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms