Protein–RNA interactions for Protein: P09871

C1S, Complement C1s subcomponent, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1SP09871 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
C1SP09871 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C1SP09871 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
C1SP09871 FAM99A-202ENST00000538190 1989 ntBASIC21.34■■□□□ 1.01
C1SP09871 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C1SP09871 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.34■■□□□ 1.01
C1SP09871 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.34■■□□□ 1.01
C1SP09871 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.34■■□□□ 1.01
C1SP09871 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.34■■□□□ 1.01
C1SP09871 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C1SP09871 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C1SP09871 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
C1SP09871 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.34■■□□□ 1.01
C1SP09871 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C1SP09871 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C1SP09871 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
C1SP09871 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
C1SP09871 KRT18P11-201ENST00000435214 1283 ntBASIC21.33■■□□□ 1.01
C1SP09871 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.33■■□□□ 1.01
C1SP09871 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C1SP09871 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
C1SP09871 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.32■■□□□ 1
C1SP09871 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
C1SP09871 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
C1SP09871 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.32■■□□□ 1
C1SP09871 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
C1SP09871 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.32■■□□□ 1
C1SP09871 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.32■■□□□ 1
C1SP09871 AC104771.1-201ENST00000603335 964 ntBASIC21.32■■□□□ 1
C1SP09871 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C1SP09871 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.32■■□□□ 1
C1SP09871 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.32■■□□□ 1
C1SP09871 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
C1SP09871 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.32■■□□□ 1
C1SP09871 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C1SP09871 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.31■■□□□ 1
C1SP09871 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.31■■□□□ 1
C1SP09871 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C1SP09871 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.31■■□□□ 1
C1SP09871 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
C1SP09871 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
C1SP09871 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.31■■□□□ 1
C1SP09871 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.31■■□□□ 1
C1SP09871 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.31■■□□□ 1
C1SP09871 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C1SP09871 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.31■■□□□ 1
C1SP09871 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
C1SP09871 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.31■■□□□ 1
C1SP09871 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
C1SP09871 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.31■■□□□ 1
C1SP09871 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.3■■□□□ 1
C1SP09871 AC004854.2-201ENST00000608450 1441 ntBASIC21.3■■□□□ 1
C1SP09871 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.3■■□□□ 1
C1SP09871 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C1SP09871 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
C1SP09871 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.3■■□□□ 1
C1SP09871 AC006970.2-201ENST00000450065 779 ntBASIC21.3■■□□□ 1
C1SP09871 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.3■■□□□ 1
C1SP09871 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.3■■□□□ 1
C1SP09871 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.3■■□□□ 1
C1SP09871 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.3■■□□□ 1
C1SP09871 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.3■■□□□ 1
C1SP09871 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
C1SP09871 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
C1SP09871 EP400NL-214ENST00000641289 2402 ntBASIC21.3■■□□□ 1
C1SP09871 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
C1SP09871 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.3■■□□□ 1
C1SP09871 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
C1SP09871 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C1SP09871 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.3■■□□□ 1
C1SP09871 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.29■■□□□ 1
C1SP09871 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.29■■□□□ 1
C1SP09871 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1SP09871 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1SP09871 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.29■■□□□ 1
C1SP09871 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.29■■□□□ 1
C1SP09871 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.29■■□□□ 1
C1SP09871 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.29■■□□□ 1
C1SP09871 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1SP09871 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.29■■□□□ 1
C1SP09871 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.29■■□□□ 1
C1SP09871 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.29■■□□□ 1
C1SP09871 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
C1SP09871 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
C1SP09871 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.28■■□□□ 1
C1SP09871 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.28■■□□□ 1
C1SP09871 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C1SP09871 KRT87P-202ENST00000534226 1464 ntBASIC21.28■■□□□ 1
C1SP09871 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.28■■□□□ 1
C1SP09871 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.28■■□□□ 1
C1SP09871 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
C1SP09871 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.28■■□□□ 1
C1SP09871 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.28■■□□□ 1
C1SP09871 AL109923.1-201ENST00000618799 583 ntBASIC21.28■■□□□ 1
C1SP09871 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.28■■□□□ 1
C1SP09871 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C1SP09871 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
C1SP09871 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C1SP09871 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C1SP09871 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms