Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP2P08253 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.51■■□□□ 1.03
MMP2P08253 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP2P08253 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP2P08253 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP2P08253 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP2P08253 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
MMP2P08253 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP2P08253 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
MMP2P08253 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP2P08253 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
MMP2P08253 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP2P08253 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP2P08253 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP2P08253 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.5■■□□□ 1.03
MMP2P08253 AC104564.3-201ENST00000582367 638 ntBASIC21.5■■□□□ 1.03
MMP2P08253 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.5■■□□□ 1.03
MMP2P08253 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP2P08253 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP2P08253 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MMP2P08253 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP2P08253 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
MMP2P08253 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP2P08253 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MMP2P08253 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP2P08253 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.49■■□□□ 1.03
MMP2P08253 CCDC92B-201ENST00000575506 885 ntBASIC21.49■■□□□ 1.03
MMP2P08253 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MMP2P08253 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.49■■□□□ 1.03
MMP2P08253 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP2P08253 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MMP2P08253 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP2P08253 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP2P08253 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.48■■□□□ 1.03
MMP2P08253 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP2P08253 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
MMP2P08253 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.48■■□□□ 1.03
MMP2P08253 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP2P08253 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.48■■□□□ 1.03
MMP2P08253 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP2P08253 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.48■■□□□ 1.03
MMP2P08253 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MMP2P08253 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.48■■□□□ 1.03
MMP2P08253 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
MMP2P08253 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
MMP2P08253 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MMP2P08253 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP2P08253 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP2P08253 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP2P08253 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP2P08253 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.47■■□□□ 1.03
MMP2P08253 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP2P08253 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
MMP2P08253 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.47■■□□□ 1.03
MMP2P08253 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.47■■□□□ 1.03
MMP2P08253 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP2P08253 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP2P08253 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.47■■□□□ 1.03
MMP2P08253 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
MMP2P08253 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
MMP2P08253 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.46■■□□□ 1.03
MMP2P08253 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.46■■□□□ 1.03
MMP2P08253 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP2P08253 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP2P08253 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP2P08253 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP2P08253 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP2P08253 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP2P08253 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
MMP2P08253 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP2P08253 AC097381.1-201ENST00000429019 1296 ntBASIC21.45■■□□□ 1.02
MMP2P08253 AC079140.4-201ENST00000507448 529 ntBASIC21.45■■□□□ 1.02
MMP2P08253 KRT18P14-201ENST00000534205 1250 ntBASIC21.45■■□□□ 1.02
MMP2P08253 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP2P08253 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP2P08253 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP2P08253 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
MMP2P08253 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms